RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 H3BML4 177 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 MKRN2OSH3BPM6 223 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 SEMA3DO95025 777 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 ACPPP15309 386 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 PTNP21246 168 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 HYAL1Q12794 435 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 NFATC4Q14934 902 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 SPIN4Q56A73 249 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 NAIF1Q69YI7 327 aaPredicted RBP11.71□□□□□ -0.53
UBE3B-203ENST00000434735 SPATC1Q76KD6 591 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 PROKR2Q8NFJ6 384 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 COL21A1Q96P44 957 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 KCND1Q9NSA2 647 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 MAGEL2Q9UJ55 1249 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 NID2Q14112 1375 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 RNF13O43567 381 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 PRAMEF12O95522 483 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 NR0B1P51843 470 aaKnown RBP11.71□□□□□ -0.53
UBE3B-203ENST00000434735 ABATP80404 500 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 LASP1Q14847 261 aaKnown RBP11.71□□□□□ -0.53
UBE3B-203ENST00000434735 TMEM201Q5SNT2 666 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 PLEKHS1Q5SXH7 462 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 DUS1LQ6P1R4 473 aaKnown RBP11.71□□□□□ -0.53
UBE3B-203ENST00000434735 FOXR2Q6PJQ5 311 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 ZFYVE21Q9BQ24 234 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 LRRC37A3O60309 1634 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 TMEM189-UBE2V1I3L0A0 370 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 GFRA3O60609 400 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 ZNF20P17024 532 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 FLYWCH1Q4VC44 716 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 SLC44A3Q8N4M1 653 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 C1GALT1C1Q96EU7 318 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 MPP4Q96JB8 637 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 UTP23Q9BRU9 249 aaKnown RBP11.71□□□□□ -0.53
UBE3B-203ENST00000434735 TMEM185BQ9H7F4 350 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 LRCH1Q9Y2L9 728 aa11.71□□□□□ -0.53
UBE3B-203ENST00000434735 A0A0A6YYC8 382 aaPredicted RBP11.71□□□□□ -0.54
UBE3B-203ENST00000434735 C11orf98E9PRG8 122 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 I3L1I5 382 aaPredicted RBP11.71□□□□□ -0.54
UBE3B-203ENST00000434735 ALOX15BO15296 676 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 PLOD3O60568 738 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 CBX6O95503 412 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 PDHA2P29803 388 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 RORAP35398 523 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 SPINT3P49223 89 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 EIF2B2P49770 351 aaKnown RBP11.71□□□□□ -0.54
UBE3B-203ENST00000434735 GALNT2Q10471 571 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 ZNF311Q5JNZ3 666 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 CCDC80Q76M96 950 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 GALNT15Q8N3T1 639 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 CPSF7Q8N684 471 aaKnown RBP11.71□□□□□ -0.54
UBE3B-203ENST00000434735 ACVR1CQ8NER5 493 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 PYDC1Q8WXC3 89 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 PGM2Q96G03 612 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 COMMD4Q9H0A8 199 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 GPN1Q9HCN4 374 aaPredicted RBP11.71□□□□□ -0.54
UBE3B-203ENST00000434735 IL1RAPQ9NPH3 570 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 MYH2Q9UKX2 1941 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 PIP5K1BO14986 540 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 SMAD6O43541 496 aaKnown RBP11.71□□□□□ -0.54
UBE3B-203ENST00000434735 CD2P06729 351 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 GBX1Q14549 363 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 OR52E4Q8NGH9 312 aa11.71□□□□□ -0.54
UBE3B-203ENST00000434735 LOC730098B7Z3J9 87 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 IL32P24001 234 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 GRIA1P42261 906 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 ZNF84P51523 738 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 TPMTP51580 245 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 JAM2P57087 298 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 POU6F2P78424 691 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-203ENST00000434735 RPL19P84098 196 aaKnown RBP11.7□□□□□ -0.54
UBE3B-203ENST00000434735 SLAMF1Q13291 335 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 RAB39AQ14964 217 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 VWA2Q5GFL6 755 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 LCN1P1Q5VSP4 162 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 DNM1P34Q6PK57 102 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 UNQ6126/PRO20091Q6UXV3 157 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 CEP97Q8IW35 865 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 GPR137CQ8N3F9 429 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 PNPLA1Q8N8W4 532 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 RBP7Q96R05 134 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 NAA11Q9BSU3 229 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-203ENST00000434735 TDRD1Q9BXT4 1180 aaKnown RBP11.7□□□□□ -0.54
UBE3B-203ENST00000434735 ASB6Q9NWX5 421 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 NME6O75414 186 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-203ENST00000434735 PEPDP12955 493 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 PVRP15151 417 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 TSPAN5P62079 268 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 MLC1Q15049 377 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 FAM174BQ3ZCQ3 159 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 SPDYCQ5MJ68 293 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.7□□□□□ -0.54
UBE3B-203ENST00000434735 TICAM1Q8IUC6 712 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 RCBTB1Q8NDN9 531 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 SPOCK2Q92563 424 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 GAL3ST3Q96A11 431 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 ASB16Q96NS5 453 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 SLC35A5Q9BS91 424 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 SMOC1Q9H4F8 434 aa11.7□□□□□ -0.54
UBE3B-203ENST00000434735 A0A1W2PPM1 405 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms