RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 RAD18Q9NS91 495 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 GPR83Q9NYM4 423 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 MAP4K5Q9Y4K4 846 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 PCM1Q15154 2024 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 C1orf105O95561 183 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 GNRH1P01148 92 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 ELFN1P0C7U0 828 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 POU2F1P14859 743 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 FUT4P22083 530 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 PCDH1Q08174 1060 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 STARD3Q14849 445 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 TEAD2Q15562 447 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 TIGD6Q17RP2 521 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 MPEG1Q2M385 716 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 EXOC3L2Q2M3D2 409 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 IFI44LQ53G44 452 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 GCNT6Q5T4J0 391 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 CCDC149Q6ZUS6 474 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 KLHDC8AQ8IYD2 350 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 CFAP206Q8IYR0 622 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 LGI4Q8N135 537 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 DNAJC22Q8N4W6 341 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 OR9Q2Q8NGE9 314 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 RHOXF1Q8NHV9 184 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 MCFD2Q8NI22 146 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 WDR48Q8TAF3 677 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.33□□□□□ -0.6
CD44-209ENST00000433892 UTP15Q8TED0 518 aaKnown RBP11.33□□□□□ -0.6
CD44-209ENST00000433892 MRGPRX3Q96LB0 322 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 YME1L1Q96TA2 773 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 DSN1Q9H410 356 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 EPS8L2Q9H6S3 715 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 TRIM39Q9HCM9 518 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 ATAD3AQ9NVI7 634 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 SPASTQ9UBP0 616 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 IL36AQ9UHA7 158 aa11.33□□□□□ -0.6
CD44-209ENST00000433892 CLCA1A8K7I4 914 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 ZNF197O14709 1029 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 CXCL14O95715 111 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 TGM1P22735 817 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 GADD45AP24522 165 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 C2orf80Q0P641 193 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 SLC5A12Q1EHB4 618 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 MICAQ29983 383 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 ZNF805Q5CZA5 627 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 FAM180BQ6P0A1 224 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 LIPIQ6XZB0 460 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 RNF130Q86XS8 419 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 CADM3Q8N126 398 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 OR52N2Q8NGI0 321 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 OR4C15Q8NGM1 316 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 PSMA8Q8TAA3 256 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 VPS35Q96QK1 796 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 INIPQ9NRY2 104 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 ATP6V1HQ9UI12 483 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 MAPRE3Q9UPY8 281 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 PCDHGA2Q9Y5H1 932 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 HCFC2Q9Y5Z7 792 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 PLXNA2O75051 1894 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 CDK1P06493 297 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 KLK1P06870 262 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 STSP08842 583 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 FURINP09958 794 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 SYN1P17600 705 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 CHI3L1P36222 383 aaPredicted RBP11.32□□□□□ -0.6
CD44-209ENST00000433892 NNMTP40261 264 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 TAS2R50P59544 299 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 CYP4F2P78329 520 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 TBCEQ15813 527 aaPredicted RBP11.32□□□□□ -0.6
CD44-209ENST00000433892 INAVAQ3KP66 663 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 PLEKHG7Q6ZR37 379 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 DPPA4Q7L190 304 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 GOT1L1Q8NHS2 421 aaPredicted RBP11.32□□□□□ -0.6
CD44-209ENST00000433892 FCGR1BQ92637 280 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 MYDGFQ969H8 173 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 PPCDCQ96CD2 204 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 REPS1Q96D71 796 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 CXorf40BQ96DE9 158 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 DACH2Q96NX9 599 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 SPNS1Q9H2V7 528 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 DMRT3Q9NQL9 472 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 C1GALT1Q9NS00 363 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 TDP1Q9NUW8 608 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 ZNF226Q9NYT6 803 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 PAIP2BQ9ULR5 123 aaKnown RBP11.32□□□□□ -0.6
CD44-209ENST00000433892 SLC6A14Q9UN76 642 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 WNT6Q9Y6F9 365 aa11.32□□□□□ -0.6
CD44-209ENST00000433892 PIPSLA2A3N6 862 aa11.31□□□□□ -0.6
CD44-209ENST00000433892 K7ESM1 405 aa11.31□□□□□ -0.6
CD44-209ENST00000433892 PCDH17O14917 1159 aa11.31□□□□□ -0.6
CD44-209ENST00000433892 KLHL18O94889 574 aa11.31□□□□□ -0.6
CD44-209ENST00000433892 ANXA8P13928 327 aa11.31□□□□□ -0.6
CD44-209ENST00000433892 MMP12P39900 470 aa11.31□□□□□ -0.6
CD44-209ENST00000433892 CTSKP43235 329 aa11.31□□□□□ -0.6
CD44-209ENST00000433892 METAP1P53582 386 aa11.31□□□□□ -0.6
CD44-209ENST00000433892 CDK6Q00534 326 aa11.31□□□□□ -0.6
CD44-209ENST00000433892 LRRC74AQ0VAA2 488 aa11.31□□□□□ -0.6
CD44-209ENST00000433892 SFSWAPQ12872 951 aaKnown RBP11.31□□□□□ -0.6
CD44-209ENST00000433892 E2F2Q14209 437 aa11.31□□□□□ -0.6
CD44-209ENST00000433892 GANABQ14697 944 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms