RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 ZNF830Q96NB3 372 aaPredicted RBP2.6□□□□□ -1.99
PTPN4-205ENST00000433888 INTS14Q96SY0 518 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 HNRNPABQ99729 332 aaKnown RBP2.6□□□□□ -1.99
PTPN4-205ENST00000433888 MMADHCQ9H3L0 296 aaPredicted RBP2.6□□□□□ -1.99
PTPN4-205ENST00000433888 RAB9BQ9NP90 201 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 IL1RAPQ9NPH3 570 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 HACD3Q9P035 362 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 ANAPC2Q9UJX6 822 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 GTF3C4Q9UKN8 822 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 RNF150Q9ULK6 438 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 ISY1Q9ULR0 285 aaKnown RBP2.6□□□□□ -1.99
PTPN4-205ENST00000433888 NTNG1Q9Y2I2 539 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 CCL27Q9Y4X3 112 aa2.6□□□□□ -1.99
PTPN4-205ENST00000433888 A0A0U1RQK1 487 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 ZNF320A2RRD8 509 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 H0Y9J4 135 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 CYTIPO60759 359 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 ATP6V1B1P15313 513 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 PTAFRP25105 342 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 PKLRP30613 574 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 GP5P40197 560 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 KCNJ1P48048 391 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 CCR3P51677 355 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 KRT83P78385 493 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 SRPXP78539 464 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 RASGEF1BQ0VAM2 473 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 AP1B1Q10567 949 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 SLMAPQ14BN4 828 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 SNAPC1Q16533 368 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 SLC10A5Q5PT55 438 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 LINC00242Q5T6M2 205 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 KRT80Q6KB66 452 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 PIWIL3Q7Z3Z3 882 aaKnown RBP2.59□□□□□ -1.99
PTPN4-205ENST00000433888 CENPVQ7Z7K6 275 aaPredicted RBP2.59□□□□□ -1.99
PTPN4-205ENST00000433888 GLRX5Q86SX6 157 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 CARM1Q86X55 608 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 CCAR2Q8N163 923 aaKnown RBP2.59□□□□□ -1.99
PTPN4-205ENST00000433888 NOA1Q8NC60 698 aaKnown RBP2.59□□□□□ -1.99
PTPN4-205ENST00000433888 CAMKVQ8NCB2 501 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 CITED2Q99967 270 aaPredicted RBP2.59□□□□□ -1.99
PTPN4-205ENST00000433888 SLC2A11Q9BYW1 496 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 EDEM3Q9BZQ6 932 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 ABCD2Q9UBJ2 740 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 PILRAQ9UKJ1 303 aa2.59□□□□□ -1.99
PTPN4-205ENST00000433888 NEDD4P46934 1319 aa2.59□□□□□ -2
PTPN4-205ENST00000433888 E9PAM4 449 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 FAM86B1E9PN63 330 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 PDHXO00330 501 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 SAP30O75446 220 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 ATP6AP2O75787 350 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 GOSR1O95249 250 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 CSN3P07498 182 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 QDPRP09417 244 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 HMOX1P09601 288 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 CCDC175P0C221 793 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 FAM86B2P0C5J1 330 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 OR52Z1P0C646 297 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 SUPT20HL2P0C7V6 817 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 SCG2P13521 617 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 CHRNA3P32297 505 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 ATP6V1E1P36543 226 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 ZNF75DP51815 510 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 POLR2LP62875 67 aaKnown RBP2.58□□□□□ -2
PTPN4-205ENST00000433888 IGLV3-21P80748 117 aaPredicted RBP2.58□□□□□ -2
PTPN4-205ENST00000433888 ACY1Q03154 408 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 TFCP2Q12800 502 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 BFSP1Q12934 665 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 BAATQ14032 418 aaPredicted RBP2.58□□□□□ -2
PTPN4-205ENST00000433888 NPTX1Q15818 432 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 DUSP5Q16690 384 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 FAM106AQ4KMX7 169 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 TCP11X2Q5H9J9 407 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 KRT39Q6A163 491 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 IGFL3Q6UXB1 125 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 CHST3Q7LGC8 479 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 OTOAQ7RTW8 1153 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 RPAINQ86UA6 219 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 METTL23Q86XA0 190 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 HIPK1Q86Z02 1210 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 FAM219AQ8IW50 185 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 ANKRD13CQ8N6S4 541 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 LRTM2Q8N967 370 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 XXYLT1Q8NBI6 393 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 MSANTD4Q8NCY6 345 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 OR4Q3Q8NH05 313 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 ITLN1Q8WWA0 313 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 ROBO4Q8WZ75 1007 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 MOB3AQ96BX8 217 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 CCDC114Q96M63 670 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 TAAR6Q96RI8 345 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 APOL2Q9BQE5 337 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 SLC39A8Q9C0K1 460 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 GPR88Q9GZN0 384 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 PDFQ9HBH1 243 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 CDH20Q9HBT6 801 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 OLAHQ9NV23 265 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 TBC1D13Q9NVG8 400 aa2.58□□□□□ -2
PTPN4-205ENST00000433888 A0A087WZ39 114 aa2.57□□□□□ -2
PTPN4-205ENST00000433888 EDDM13A0A1B0GTR0 161 aa2.57□□□□□ -2
PTPN4-205ENST00000433888 SMIM30A4D0T7 59 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms