RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ERVV-2B6SEH9 535 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 RTCAO00442 366 aaKnown RBP2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 KIF5CO60282 957 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 CRCPO75575 148 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 STBD1O95210 358 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 IGLV2-11P01706 119 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 CD48P09326 243 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 PATE4P0C8F1 98 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 PRSS56P0CW18 603 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 P4HA1P13674 534 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 CETN2P41208 172 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 CD86P42081 329 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 TNFSF10P50591 281 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 CDR2Q01850 454 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC3A1Q07837 685 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 HNRNPA0Q13151 305 aaKnown RBP2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 TSTA3Q13630 321 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 GK2Q14410 553 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 ACKR1Q16570 336 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 EPC2Q52LR7 807 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZNF542PQ5EBM4 170 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 LCN1P1Q5VSP4 162 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 NEK5Q6P3R8 708 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC24A5Q71RS6 500 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 BTN2A1Q7KYR7 527 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 TMEM126BQ8IUX1 230 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 HDDC3Q8N4P3 179 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 TEX26Q8N6G2 289 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 KBTBD8Q8NFY9 601 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 OR10V1Q8NGI7 309 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 OR52E1Q8NGJ3 308 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 OR10G8Q8NGN5 311 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 KIAA1524Q8TCG1 905 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 URGCPQ8TCY9 931 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC13A3Q8WWT9 602 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 METTL21AQ8WXB1 218 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 CASP10Q92851 521 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 TMEM143Q96AN5 459 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 TMEM186Q96B77 213 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 LGALS12Q96DT0 336 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 DTD2Q96FN9 168 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZNF577Q9BSK1 485 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 CCM2Q9BSQ5 444 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 TDRD1Q9BXT4 1180 aaKnown RBP2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 CARD9Q9H257 536 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 HSD3B7Q9H2F3 369 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 TNMDQ9H2S6 317 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 CUEDC2Q9H467 287 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 SDF2L1Q9HCN8 221 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 MOSPD1Q9UJG1 213 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 EXOC6BQ9Y2D4 811 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 RPH3AQ9Y2J0 694 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 TDRKHQ9Y2W6 561 aaKnown RBP2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 PLA2R1Q13018 1463 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 SHANK2Q9UPX8 1470 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 FAM135BQ49AJ0 1406 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 PREX1Q8TCU6 1659 aa2.76□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZCCHC11Q5TAX3 1644 aaKnown RBP2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 IQGAP2Q13576 1575 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 NEDD4P46934 1319 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 UMODL1Q5DID0 1318 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZFYVE16Q7Z3T8 1539 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 UGGT2Q9NYU1 1516 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ARHGEF12Q9NZN5 1544 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 IGHV4-4A0A075B6R2 117 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 A0A087WZ39 114 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 C2orf92A0A1B0GVN3 265 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ATP6AP2A0A1C7CYW4 349 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 NKX6-3A6NJ46 265 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 PMS2P5A8MQ11 134 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 KRTAP29-1A8MX34 341 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZNF732B4DXR9 585 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 E5RGE8 158 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLCO1B7G3V0H7 640 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 BLOC1S5-TXNDC5H3BN57 136 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 M0R296 226 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 TLR4O00206 839 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 RNF103O00237 685 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 EPHB6O15197 1021 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 PCDH7O60245 1069 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 CYTIPO60759 359 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 CLN5O75503 358 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZFAND5O76080 213 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 CXCL10P02778 98 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 MT-ND2P03891 347 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ALPPP05187 535 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 SBK2P0C263 348 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ALPPL2P10696 532 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 SLC2A2P11168 524 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 SKILP12757 684 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 GNB3P16520 340 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 AHCYP23526 432 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 FCARP24071 287 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 ACP1P24666 158 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 LEPRP48357 1165 aaKnown RBP2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 DCDC1P59894 354 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 GNB1P62873 340 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 GUCY2DQ02846 1103 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 PTPN14Q15678 1187 aa2.75□□□□□ -1.97
HMGB1P27-201ENST00000431429 KRTAP24-1Q3LI83 254 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms