RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 MAGEB17A8MXT2 336 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 H0YIG0 161 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 MANBAO00462 879 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 LCE2BO14633 110 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 FFAR3O14843 346 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 GPR42O15529 346 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 KLK10O43240 276 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 KLHL18O94889 574 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 ALBP02768 609 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 ENO1P06733 434 aaKnown RBP11.77□□□□□ -0.53
USP40-205ENST00000430158 CCNYL3P0C7X3 344 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 ZNF888P0CJ79 500 aaPredicted RBP11.77□□□□□ -0.53
USP40-205ENST00000430158 ALOX12P18054 663 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 IL1RNP18510 177 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 TCN2P20062 427 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 ATP1A2P50993 1020 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 EFNA3P52797 238 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 FOXL2P58012 376 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 RGS1Q08116 209 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 GALNT1Q10472 559 aaPredicted RBP11.77□□□□□ -0.53
USP40-205ENST00000430158 HERC3Q15034 1050 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 NCF4Q15080 339 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 RBBP7Q16576 425 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 NDUFA9Q16795 377 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 TOR1AIP1Q5JTV8 583 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 TCHHL1Q5QJ38 904 aaPredicted RBP11.77□□□□□ -0.53
USP40-205ENST00000430158 FRG2Q64ET8 278 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 ABHD17CQ6PCB6 329 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 ZCCHC23Q6ZST2 131 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 METTL27Q8N6F8 245 aaPredicted RBP11.77□□□□□ -0.53
USP40-205ENST00000430158 CDYL2Q8N8U2 506 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 OR2L5Q8NG80 312 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 ZCCHC10Q8TBK6 192 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 SNRNP27Q8WVK2 155 aaKnown RBP11.77□□□□□ -0.53
USP40-205ENST00000430158 ATP6V1E2Q96A05 226 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 GAL3ST3Q96A11 431 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 SLC45A3Q96JT2 553 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 MAGEB10Q96LZ2 347 aaPredicted RBP11.77□□□□□ -0.53
USP40-205ENST00000430158 FRG2BQ96QU4 278 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 KCNA7Q96RP8 456 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 MTERF1Q99551 399 aaKnown RBP11.77□□□□□ -0.53
USP40-205ENST00000430158 TRMOQ9BU70 441 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 GPR87Q9BY21 358 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 SLC29A3Q9BZD2 475 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 ZNF304Q9HCX3 659 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 FARSBQ9NSD9 589 aaKnown RBP11.77□□□□□ -0.53
USP40-205ENST00000430158 TXLNGQ9NUQ3 528 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 STK38LQ9Y2H1 464 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 NAALAD2Q9Y3Q0 740 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 MAU2Q9Y6X3 613 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 PIEZO2Q9H5I5 2752 aa11.77□□□□□ -0.53
USP40-205ENST00000430158 NUP210LQ5VU65 1888 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 CROCCQ5TZA2 2017 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 SGK494L7N484 410 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 SCELO95171 688 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 RECKO95980 971 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 TGFB1P01137 390 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 SERPIND1P05546 499 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 CHRNGP07510 517 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 FGF4P08620 206 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 PCNAP12004 261 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 AGXTP21549 392 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 PTPN4P29074 926 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 DLSTP36957 453 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 HTR6P50406 440 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 RAB8AP61006 207 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 STXBP1P61764 594 aaKnown RBP11.76□□□□□ -0.53
USP40-205ENST00000430158 RPS13P62277 151 aaKnown RBP11.76□□□□□ -0.53
USP40-205ENST00000430158 CUL3Q13618 768 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 RUNX2Q13950 521 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 RCN2Q14257 317 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 SLC9A5Q14940 896 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 NKG7Q16617 165 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 SYT16Q17RD7 645 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 UGT3A2Q3SY77 523 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 DEFB134Q4QY38 66 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 ARL13AQ5H913 290 aaPredicted RBP11.76□□□□□ -0.53
USP40-205ENST00000430158 C10orf62Q5T681 223 aaPredicted RBP11.76□□□□□ -0.53
USP40-205ENST00000430158 FAM69BQ5VUD6 431 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 KHDRBS2Q5VWX1 349 aaKnown RBP11.76□□□□□ -0.53
USP40-205ENST00000430158 ZNF793Q6ZN11 406 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 MED25Q71SY5 747 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 MYLK4Q86YV6 388 aaPredicted RBP11.76□□□□□ -0.53
USP40-205ENST00000430158 NUDCD3Q8IVD9 361 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 IL22RA1Q8N6P7 574 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 ENDOVQ8N8Q3 282 aaKnown RBP11.76□□□□□ -0.53
USP40-205ENST00000430158 OR5T3Q8NGG3 340 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 REPS1Q96D71 796 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 CMTM7Q96FZ5 175 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 CCNL2Q96S94 520 aaPredicted RBP11.76□□□□□ -0.53
USP40-205ENST00000430158 SPSB2Q99619 263 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 TGIF2Q9GZN2 237 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 C20orf27Q9GZN8 174 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 REXO4Q9GZR2 422 aaKnown RBP11.76□□□□□ -0.53
USP40-205ENST00000430158 OR51B5Q9H339 312 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 ZNF395Q9H8N7 513 aaPredicted RBP11.76□□□□□ -0.53
USP40-205ENST00000430158 WDR54Q9H977 334 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 CLK4Q9HAZ1 481 aaKnown RBP11.76□□□□□ -0.53
USP40-205ENST00000430158 MLXIPLQ9NP71 852 aa11.76□□□□□ -0.53
USP40-205ENST00000430158 MID1IP1Q9NPA3 183 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms