RNA–Protein interactions for RNA: ENST00000428830.6

CHEK1-203, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-203ENST00000428830 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.31□□□□□ -0.446e-7■■■■■ 28.7
CHEK1-203ENST00000428830 GFM2Q969S9 779 aaKnown RBP12.31□□□□□ -0.44
CHEK1-203ENST00000428830 TESCQ96BS2 214 aa12.31□□□□□ -0.44
CHEK1-203ENST00000428830 NPAS2Q99743 824 aa12.31□□□□□ -0.44
CHEK1-203ENST00000428830 PRRX2Q99811 253 aa12.31□□□□□ -0.44
CHEK1-203ENST00000428830 CCDC3Q9BQI4 270 aa12.31□□□□□ -0.44
CHEK1-203ENST00000428830 CHRNA10Q9GZZ6 450 aa12.31□□□□□ -0.44
CHEK1-203ENST00000428830 DDX31Q9H8H2 851 aaKnown RBP12.31□□□□□ -0.44
CHEK1-203ENST00000428830 DNAAF2Q9NVR5 837 aaKnown RBP12.31□□□□□ -0.44
CHEK1-203ENST00000428830 NDE1Q9NXR1 346 aa12.31□□□□□ -0.44
CHEK1-203ENST00000428830 MAPRE3Q9UPY8 281 aa12.31□□□□□ -0.44
CHEK1-203ENST00000428830 PCDHGB2Q9Y5G2 931 aa12.31□□□□□ -0.44
CHEK1-203ENST00000428830 MN1Q10571 1320 aaPredicted RBP12.31□□□□□ -0.44
CHEK1-203ENST00000428830 SPTBP11277 2137 aa12.31□□□□□ -0.44
CHEK1-203ENST00000428830 SCN3AQ9NY46 2000 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 IGHV5-51A0A0C4DH38 117 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 URADA6NGE7 173 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 MRASO14807 208 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 CFLARO15519 480 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 ZSCAN9O15535 394 aaPredicted RBP12.3□□□□□ -0.44
CHEK1-203ENST00000428830 P2RX6O15547 441 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 AKAP10O43572 662 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 EEDO75530 441 aaKnown RBP12.3□□□□□ -0.44
CHEK1-203ENST00000428830 ZBTB11O95625 1053 aaPredicted RBP12.3□□□□□ -0.44
CHEK1-203ENST00000428830 PGRP06401 933 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 CKMT1AP12532 417 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 GRK6P43250 576 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 MAPK12P53778 367 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 SLC25A3Q00325 362 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 CFHR1Q03591 330 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 DPY19L1Q2PZI1 675 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 HKDC1Q2TB90 917 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 INAVAQ3KP66 663 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 SPANXN4Q5MJ08 99 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 MANEAQ5SRI9 462 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 ABHD17CQ6PCB6 329 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 IKBIPQ70UQ0 350 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 DSELQ8IZU8 1212 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 TMEM132CQ8N3T6 1108 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 SUMF1Q8NBK3 374 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 KCT2Q8NC54 265 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 GAL3ST3Q96A11 431 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 TEFMQ96QE5 360 aaKnown RBP12.3□□□□□ -0.44
CHEK1-203ENST00000428830 TBCDQ9BTW9 1192 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 KCNH6Q9H252 994 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 MYNNQ9NPC7 610 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 SOHLH2Q9NX45 425 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 KLHL3Q9UH77 587 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 WBP11Q9Y2W2 641 aaKnown RBP12.3□□□□□ -0.44
CHEK1-203ENST00000428830 CFAP73A6NFT4 308 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 MAP3K7O43318 606 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 SH3BP5O60239 455 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 KLHL18O94889 574 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 EIF2S1P05198 315 aaKnown RBP12.3□□□□□ -0.44
CHEK1-203ENST00000428830 ZNF806P0C7X5 589 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 ITGAXP20702 1163 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 HPCAL1P37235 193 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
CHEK1-203ENST00000428830 DUSP3P51452 185 aaPredicted RBP12.3□□□□□ -0.44
CHEK1-203ENST00000428830 DGKQP52824 942 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 TAS2R50P59544 299 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 DAB2P98082 770 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 TCF15Q12870 199 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 SQSTM1Q13501 440 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 PERM1Q5SV97 790 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 DBX2Q6ZNG2 339 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 RETREG3Q86VR2 466 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 MCATQ8IVS2 390 aaKnown RBP12.3□□□□□ -0.44
CHEK1-203ENST00000428830 DNAJC22Q8N4W6 341 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 CSNK1A1LQ8N752 337 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 C16orf78Q8WTQ4 265 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 NUDT8Q8WV74 236 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 MCUR1Q96AQ8 359 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 NLNQ9BYT8 704 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 PDE7BQ9NP56 450 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 PRDM7Q9NQW5 492 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 LEF1Q9UJU2 399 aaPredicted RBP12.3□□□□□ -0.44
CHEK1-203ENST00000428830 BTBD3Q9Y2F9 522 aa12.3□□□□□ -0.44
CHEK1-203ENST00000428830 MUC6Q6W4X9 2439 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 A0A0A6YYD5 115 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 A0A0G2JN53 185 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 ASPDHA6ND91 283 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 C4orf51C9J302 202 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 SCAMP2O15127 329 aaKnown RBP12.29□□□□□ -0.44
CHEK1-203ENST00000428830 HCRTR1O43613 425 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 SRPX2O60687 465 aaPredicted RBP12.29□□□□□ -0.44
CHEK1-203ENST00000428830 COX7A2P14406 83 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 HIST1H1TP22492 207 aaPredicted RBP12.29□□□□□ -0.44
CHEK1-203ENST00000428830 S100A3P33764 101 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 KIR3DL1P43629 444 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 GSTM5P46439 218 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 VSX2P58304 361 aaPredicted RBP12.29□□□□□ -0.44
CHEK1-203ENST00000428830 RAB8AP61006 207 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 KCNJ2P63252 427 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 SRSF11Q05519 484 aaKnown RBP12.29□□□□□ -0.44
CHEK1-203ENST00000428830 TLR1Q15399 786 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 UGT8Q16880 541 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 DEFB110Q30KQ9 67 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 C16orf89Q6UX73 402 aa12.29□□□□□ -0.44
CHEK1-203ENST00000428830 HACD2Q6Y1H2 254 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms