RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ZNF805Q5CZA5 627 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 HENMT1Q5T8I9 393 aaKnown RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 GRHL2Q6ISB3 625 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 SLC16A12Q6ZSM3 486 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 NEK10Q6ZWH5 1172 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 PARS2Q7L3T8 475 aaKnown RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 VPS37AQ8NEZ2 397 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 OR7G3Q8NG95 312 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 OR4K1Q8NGD4 311 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 OR8J2Q8NGG1 315 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 OR4A15Q8NGL6 344 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 SPPL2AQ8TCT8 520 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 BTN2A2Q8WVV5 523 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 GLYATL1Q969I3 302 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 NEIL2Q969S2 332 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 MAGEB10Q96LZ2 347 aaPredicted RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 FOPNLQ96NB1 174 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 HHIPQ96QV1 700 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 CDX2Q99626 313 aaPredicted RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 APOL4Q9BPW4 351 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 GPN2Q9H9Y4 310 aaPredicted RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 COQ6Q9Y2Z9 468 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 NDUFB5O43674 189 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 NARSO43776 548 aaKnown RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 PRMT3O60678 531 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 UGDHO60701 494 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 FAM20BO75063 409 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 INHBBP09529 407 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 FOSL2P15408 326 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 HOXB6P17509 224 aaKnown RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 ITIH1P19827 911 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 TNFRSF1BP20333 461 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 PCMT1P22061 227 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 HOXD11P31277 338 aaPredicted RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 HNF4AP41235 474 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 CRATP43155 626 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 RGS19P49795 217 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 RAE1P78406 368 aaKnown RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 TFF2Q03403 129 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 TMEM115Q12893 351 aaPredicted RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 ZC3H12BQ5HYM0 836 aaKnown RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 CATSPEREQ5SY80 951 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 KDM4DQ6B0I6 523 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 LAIR1Q6GTX8 287 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 Q6ZNX1 250 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 EIF3MQ7L2H7 374 aaKnown RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 ZNF540Q8NDQ6 660 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 FAR1Q8WVX9 515 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 OR8D1Q8WZ84 308 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 POP5Q969H6 163 aaKnown RBP10.25□□□□□ -0.77
CUX1-205ENST00000425244 FKBP10Q96AY3 582 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 SIRT5Q9NXA8 310 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 SCN3BQ9NY72 215 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 ENPP5Q9UJA9 477 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 RABL2BQ9UNT1 228 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 TPRKBQ9Y3C4 175 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 PIAS3Q9Y6X2 628 aa10.25□□□□□ -0.77
CUX1-205ENST00000425244 EDDM13A0A1B0GTR0 161 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 PRR23AA6NEV1 266 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 MBTPS2O43462 519 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 SUV39H1O43463 412 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 PCDH7O60245 1069 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 ACPPP15309 386 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 MEF2AQ02078 507 aaPredicted RBP10.24□□□□□ -0.77
CUX1-205ENST00000425244 ITGADQ13349 1161 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 ELAVL3Q14576 367 aaKnown RBP10.24□□□□□ -0.77
CUX1-205ENST00000425244 NUDT18Q6ZVK8 323 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 CBLL1Q75N03 491 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 TRAPPC5Q8IUR0 188 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 CFAP206Q8IYR0 622 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 NAGSQ8N159 534 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 TMCO5AQ8N6Q1 288 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 ABHD11Q8NFV4 315 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 GLMNQ92990 594 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 CLIP3Q96DZ5 547 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 FCRL1Q96LA6 429 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 CCM2Q9BSQ5 444 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 GABARAPL1Q9H0R8 117 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 TMEM245Q9H330 911 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 DYRK4Q9NR20 520 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 TESMINQ9Y4I5 508 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 KCNE2Q9Y6J6 123 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 STON1Q9Y6Q2 735 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 COL4A3Q01955 1670 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 FRYLO94915 3013 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 DMDP11532 3685 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 NPIPB8E9PQR5 432 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 H0YIV9 168 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 H3BM21 787 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 MT-ND2P03891 347 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 CTHP32929 405 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 OPRL1P41146 370 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 DCDC1P59894 354 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 CAPN13Q6MZZ7 669 aaPredicted RBP10.24□□□□□ -0.77
CUX1-205ENST00000425244 GPR153Q6NV75 609 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 Q6ZPB1 254 aaPredicted RBP10.24□□□□□ -0.77
CUX1-205ENST00000425244 SLC44A3Q8N4M1 653 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 OR52J3Q8NH60 311 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 SLC6A17Q9H1V8 727 aa10.24□□□□□ -0.77
CUX1-205ENST00000425244 ADPRHL2Q9NX46 363 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms