RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CLDN19Q8N6F1 224 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 RACGAP1Q9H0H5 632 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 MAGIXQ9H6Y5 334 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ZNF408Q9H9D4 720 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 RDH8Q9NYR8 311 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 CSNK1G3Q9Y6M4 447 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 LOC730098B7Z3J9 87 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 CLIC1O00299 241 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ADAMDEC1O15204 470 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 HPGDSO60760 199 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 CXCL3P19876 107 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 CHMP24386 653 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ZNF81P51508 661 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 CLCN4P51793 760 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ARHGDIBP52566 201 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 MAB21L1Q13394 359 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 PPIGQ13427 754 aaKnown RBP eCLIP10.86□□□□□ -0.672e-8■■□□□ 12.7
SEC61A1-202ENST00000424880 PCBP1Q15365 356 aaKnown RBP eCLIP10.86□□□□□ -0.672e-6■□□□□ 10.2
SEC61A1-202ENST00000424880 AANATQ16613 207 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 BHLHA9Q7RTU4 235 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 BBS7Q8IWZ6 715 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 KLHDC8BQ8IXV7 354 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 TMEM132CQ8N3T6 1108 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 OR10G2Q8NGC3 310 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 RAET1EQ8TD07 263 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 COPS8Q99627 209 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 LRTM1Q9HBL6 345 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 KLK4Q9Y5K2 254 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 GSAPA4D1B5 854 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ACSL4O60488 711 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ATG13O75143 517 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 KCNK5O95279 499 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 STAU1O95793 577 aaKnown RBP10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 PEX11BO96011 259 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 F9P00740 461 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 TGFB3P10600 412 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 PSMA1P25786 263 aaKnown RBP10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ACVRL1P37023 503 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 INPP1P49441 399 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 AGFG1P52594 562 aaKnown RBP10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 CRYBA2P53672 197 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 RRAS2P62070 204 aaPredicted RBP10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 SPIBQ01892 262 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 COL19A1Q14993 1142 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 PTGES3Q15185 160 aaKnown RBP10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 EXOC3L2Q2M3D2 409 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 GARNL3Q5VVW2 1013 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 LRRC52Q8N7C0 313 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 OR7D4Q8NG98 312 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 GPR152Q8TDT2 470 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 LINC00052Q96N35 136 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ZNF382Q96SR6 550 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 TMEM121BQ9BXQ6 578 aaPredicted RBP10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 CATSPERBQ9H7T0 1116 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ELOVL2Q9NXB9 296 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 ERAP1Q9NZ08 941 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 SRRDQ9UH36 339 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 SLC9A8Q9Y2E8 581 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 HS3ST4Q9Y661 456 aa10.86□□□□□ -0.67
SEC61A1-202ENST00000424880 LRRC37A2A6NM11 1700 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 LOC105369274A0A096LPK9 316 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 LZTS3O60299 673 aaPredicted RBP10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 ENTPD6O75354 484 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 SLC25A27O95847 323 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 TBX18O95935 607 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 IL6P05231 212 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 PROS1P07225 676 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 HBQ1P09105 142 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 CPN2P22792 545 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 GKP32189 559 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 CNR2P34972 360 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 CRYBB2P43320 205 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 AVPR1BP47901 424 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 EXOSC2Q13868 293 aaKnown RBP10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 C6orf132Q5T0Z8 1188 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 FAM180BQ6P0A1 224 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 CALHM3Q86XJ0 350 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 OR4N4Q8N0Y3 316 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 HERVK_113Q902F9 699 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 C1GALT1C1Q96EU7 318 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 MS4A3Q96HJ5 214 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 APOLD1Q96LR9 279 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 GABARAPL1Q9H0R8 117 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 CLMPQ9H6B4 373 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 ATP6V1HQ9UI12 483 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 PPIEQ9UNP9 301 aaKnown RBP10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 DIMT1Q9UNQ2 313 aaKnown RBP10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 CCL27Q9Y4X3 112 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 NYNRINQ9P2P1 1898 aaKnown RBP10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 PRAMEF33A0A0G2JMD5 474 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 TMEM88BA6NKF7 163 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 FAM220BPB1ANY3 271 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 PRAMEF10O60809 474 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 CSO75390 466 aaKnown RBP10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 RPP40O75818 363 aaKnown RBP10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 PDE9AO76083 593 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 FOSL1P15407 271 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 VMACQ2NL98 169 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 TUSC1Q2TAM9 212 aa10.85□□□□□ -0.67
SEC61A1-202ENST00000424880 FAHD1Q6P587 224 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms