RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 SLC22A14Q9Y267 594 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 IKBKGQ9Y6K9 419 aa12.22□□□□□ -0.45
VRK3-203ENST00000424804 SGK494L7N484 410 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 OR1F1O43749 312 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 PRAMEF2O60811 474 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 INHBAP08476 426 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 CYC1P08574 325 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 C8orf89P0DMQ9 161 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 ICAM2P13598 275 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 CD1DP15813 335 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 IL1RNP18510 177 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 HRH2P25021 359 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 GDF5P43026 501 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 ST13P50502 369 aaKnown RBP12.21□□□□□ -0.45
VRK3-203ENST00000424804 CCR8P51685 355 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 PER3P56645 1201 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 ATP6V0D1P61421 351 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 RPS15AP62244 130 aaKnown RBP12.21□□□□□ -0.45
VRK3-203ENST00000424804 PMP22Q01453 160 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 RHAGQ02094 409 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 CATSPEREQ5SY80 951 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 FCRLBQ6BAA4 426 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 GSPT2Q8IYD1 628 aaKnown RBP12.21□□□□□ -0.45
VRK3-203ENST00000424804 AFAP1L2Q8N4X5 818 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 MDS2Q8NDY4 140 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 PLPP5Q8NEB5 264 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 OR4K1Q8NGD4 311 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 OR56A3Q8NH54 315 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 DNAJB8Q8NHS0 232 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 SLC5A11Q8WWX8 675 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 MARVELD3Q96A59 401 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 THAP11Q96EK4 314 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 CCDC120Q96HB5 630 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 MAGEB10Q96LZ2 347 aaPredicted RBP12.21□□□□□ -0.45
VRK3-203ENST00000424804 SIGLEC12Q96PQ1 595 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 SARGQ9BW04 601 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.21□□□□□ -0.45
VRK3-203ENST00000424804 ALG9Q9H6U8 611 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 HCN3Q9P1Z3 774 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 TACC2O95359 2948 aa12.21□□□□□ -0.45
VRK3-203ENST00000424804 ARHGAP10A1A4S6 786 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 ENO4A6NNW6 628 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 SUPT3HB4E1H0 165 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 HNRNPRO43390 633 aaKnown RBP12.2□□□□□ -0.46
VRK3-203ENST00000424804 SUPT3HO75486 399 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 UNC5CO95185 931 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 RASAL1O95294 804 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 TFEBP19484 476 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 POU3F2P20265 443 aaPredicted RBP12.2□□□□□ -0.46
VRK3-203ENST00000424804 CRABP2P29373 138 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 ECHS1P30084 290 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 CA7P43166 264 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 XCR1P46094 333 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 AVPR1BP47901 424 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 IRF9Q00978 393 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 ART3Q13508 389 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 RBBP5Q15291 538 aaKnown RBP12.2□□□□□ -0.46
VRK3-203ENST00000424804 CDSNQ15517 529 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 TGFBIQ15582 683 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 OR4D1Q15615 310 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 ZKSCAN8Q15776 578 aaPredicted RBP12.2□□□□□ -0.46
VRK3-203ENST00000424804 NDUFA9Q16795 377 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 ACER2Q5QJU3 275 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 GFRALQ6UXV0 394 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 ASPGQ86U10 573 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 BEST3Q8N1M1 668 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 TBC1D19Q8N5T2 526 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 SNX31Q8N9S9 440 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 KCTD4Q8WVF5 259 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 ANKRD7Q92527 254 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 NEIL2Q969S2 332 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 ESAMQ96AP7 390 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 MOCOSQ96EN8 888 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 OR4K3Q96R72 315 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 HES7Q9BYE0 225 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 VPS11Q9H270 941 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 ACSS3Q9H6R3 686 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 COPG2Q9UBF2 871 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 ZNF835Q9Y2P0 537 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 ACOT9Q9Y305 439 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 PCDHGB6Q9Y5F9 930 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 CACNA1CQ13936 2221 aa12.2□□□□□ -0.46
VRK3-203ENST00000424804 A0A087WUV0 522 aaPredicted RBP12.19□□□□□ -0.46
VRK3-203ENST00000424804 PRSS44E7EML9 344 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 CLGNO14967 610 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 NDUFS4O43181 175 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 CCNT2O60583 730 aaKnown RBP12.19□□□□□ -0.46
VRK3-203ENST00000424804 RDH16O75452 317 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 B3GALT4O96024 378 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 SLC35E2BP0CK96 405 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 TYK2P29597 1187 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 CD96P40200 585 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 MSH2P43246 934 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 HSPA7P48741 367 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 HNMTP50135 292 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 ADORA2A-AS1P86434 159 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 CDKL1Q00532 357 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 ZNF33BQ06732 778 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 TUBA3CQ13748 450 aa12.19□□□□□ -0.46
VRK3-203ENST00000424804 MFSD4BQ5TF39 518 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms