RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 C3orf18Q9UK00 162 aa5.08□□□□□ -1.6
VPS8-205ENST00000424721 TTC7AQ9ULT0 858 aaPredicted RBP5.08□□□□□ -1.6
VPS8-205ENST00000424721 PLA2G2DQ9UNK4 145 aa5.08□□□□□ -1.6
VPS8-205ENST00000424721 KLK4Q9Y5K2 254 aa5.08□□□□□ -1.6
VPS8-205ENST00000424721 KLF2Q9Y5W3 355 aaPredicted RBP5.08□□□□□ -1.6
VPS8-205ENST00000424721 NOTCH2Q04721 2471 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 CREBBPQ92793 2442 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 PRSS44E7EML9 344 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 CCL22O00626 93 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 SOCS6O14544 535 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 ZBTB14O43829 449 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 ULK1O75385 1050 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 SUN1O94901 812 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 METTL18O95568 372 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 TSPAN15O95858 294 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 GOT2P00505 430 aaKnown RBP5.07□□□□□ -1.6
VPS8-205ENST00000424721 IFNB1P01574 187 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 UMODP07911 640 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 MED14OSP0DP75 135 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 CHRM3P20309 590 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 CAPN3P20807 821 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 AGAP20933 346 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 FBLP22087 321 aaKnown RBP5.07□□□□□ -1.6
VPS8-205ENST00000424721 IL10P22301 178 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 AOAHP28039 575 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 TNFRSF8P28908 595 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 CCR7P32248 378 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 FOXN2P32314 431 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 RPA3P35244 121 aaPredicted RBP5.07□□□□□ -1.6
VPS8-205ENST00000424721 PTGER4P35408 488 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 GRIA3P42263 894 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 OR1D4P47884 311 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 CSE1LP55060 971 aaKnown RBP5.07□□□□□ -1.6
VPS8-205ENST00000424721 SKP1P63208 163 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 ABATP80404 500 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 CDK16Q00536 496 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 KLC1Q07866 573 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 ACTN3Q08043 901 aaPredicted RBP5.07□□□□□ -1.6
VPS8-205ENST00000424721 KLF1Q13351 362 aaPredicted RBP5.07□□□□□ -1.6
VPS8-205ENST00000424721 FAM53BQ14153 422 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 GBX1Q14549 363 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 ZXDCQ2QGD7 858 aaPredicted RBP5.07□□□□□ -1.6
VPS8-205ENST00000424721 DEFB110Q30KQ9 67 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 TTLL9Q3SXZ7 439 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 PRR30Q53SZ7 412 aaPredicted RBP5.07□□□□□ -1.6
VPS8-205ENST00000424721 SEL1L2Q5TEA6 688 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 FAM69BQ5VUD6 431 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 C1QL3Q5VWW1 255 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 ATG9BQ674R7 924 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 HIST2H2BCQ6DN03 193 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 NIPAL1Q6NVV3 410 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 CNSTQ6PJW8 725 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 LINC00696Q6ZRV3 163 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 GSTA5Q7RTV2 222 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 PALM2Q8IXS6 379 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 C2orf73Q8N5S3 287 aaPredicted RBP5.07□□□□□ -1.6
VPS8-205ENST00000424721 TBC1D19Q8N5T2 526 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 RNF10Q8N5U6 811 aaKnown RBP5.07□□□□□ -1.6
VPS8-205ENST00000424721 OTUD6BQ8N6M0 293 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 TC2NQ8N9U0 490 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 FAM98AQ8NCA5 519 aaKnown RBP5.07□□□□□ -1.6
VPS8-205ENST00000424721 OR52K1Q8NGK4 314 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 STT3BQ8TCJ2 826 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 SMPDL3AQ92484 453 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 SIGLEC10Q96LC7 697 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 ZNF354BQ96LW1 612 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 ZNF285Q96NJ3 590 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 TMEM121Q9BTD3 319 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 TUBB6Q9BUF5 446 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 IL22Q9GZX6 179 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 PCBD2Q9H0N5 130 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 CCDC68Q9H2F9 335 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 MRPS30Q9NP92 439 aaKnown RBP5.07□□□□□ -1.6
VPS8-205ENST00000424721 OXSMQ9NWU1 459 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 SPATA7Q9P0W8 599 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 TRPC4Q9UBN4 977 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 SEC14L3Q9UDX4 400 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 PLAGL1Q9UM63 463 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 HS3ST3B1Q9Y662 390 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 PRSS21Q9Y6M0 314 aa5.07□□□□□ -1.6
VPS8-205ENST00000424721 SEC16AO15027 2179 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 TEX15Q9BXT5 2789 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 TRGV8A0A0C4DH27 118 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 A0A0J9YVX5 310 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 ARHGAP10A1A4S6 786 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 PABPN1LA6NDY0 278 aaKnown RBP5.06□□□□□ -1.6
VPS8-205ENST00000424721 FAM90A27PA6NNH2 459 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 E5RI56 91 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 CCL21O00585 134 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 TTI1O43156 1089 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 OR1I1O60431 355 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 C1orf105O95561 183 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 CATP04040 527 aaKnown RBP5.06□□□□□ -1.6
VPS8-205ENST00000424721 C8BP07358 591 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 APRTP07741 180 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 PRR35P0CG20 571 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 COX6B1P14854 86 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 CD53P19397 219 aa5.06□□□□□ -1.6
VPS8-205ENST00000424721 RPS3P23396 243 aaKnown RBP eCLIP5.06□□□□□ -1.6
VPS8-205ENST00000424721 ATP5DP30049 168 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms