RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 GRK3P35626 688 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 KIR2DL3P43628 341 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 CLCN2P51788 898 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 TBPL1P62380 186 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 PPIAP62937 165 aaKnown RBP15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 SKP1P63208 163 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 PWP1Q13610 501 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 SLC25A35Q3KQZ1 300 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 CES3Q6UWW8 571 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 B3GNT6Q6ZMB0 384 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 C17orf64Q86WR6 236 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 CDC20BQ86Y33 519 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 CILP2Q8IUL8 1156 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 INTS10Q9NVR2 710 aaKnown RBP15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 PPIEQ9UNP9 301 aaKnown RBP15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 VPS9D1Q9Y2B5 631 aa15.59■□□□□ 0.09
CHCHD3-202ENST00000423635 PINLYPA6NC86 204 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 FIGNL2A6NMB9 653 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 RPL22P35268 128 aaKnown RBP15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 DGKQP52824 942 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 OLR1P78380 273 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 CUL1Q13616 776 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 DEFB134Q4QY38 66 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 KIAA0930Q6ICG6 404 aaPredicted RBP15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 ZNF585AQ6P3V2 769 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 UBE2R2Q712K3 238 aaPredicted RBP15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 GPALPP1Q8IXQ4 340 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 PSD4Q8NDX1 1056 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 B3GNT7Q8NFL0 401 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 OR4K1Q8NGD4 311 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 OR5M9Q8NGP3 310 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 GOT1L1Q8NHS2 421 aaPredicted RBP15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 KCNJ9Q92806 393 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 NECTIN3Q9NQS3 549 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 PRDM9Q9NQV7 894 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 SOX13Q9UN79 622 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 YARS2Q9Y2Z4 477 aaKnown RBP15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 DHRS7Q9Y394 339 aa15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 REXO2Q9Y3B8 237 aaKnown RBP15.58■□□□□ 0.08
CHCHD3-202ENST00000423635 TRBV11-1A0A0K0K1C0 115 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 SYT5O00445 386 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 GLSO94925 669 aaPredicted RBP15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 ZSCAN5DPP0CG00 497 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 NPPBP16860 134 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 MAOAP21397 527 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 MGAT1P26572 445 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 ADH7P40394 386 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 SSR4P51571 173 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 GPR143P51810 404 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 TERF2Q15554 542 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 SKOR2Q2VWA4 1001 aaPredicted RBP15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 NEPROQ6NW34 567 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 LCTLQ6UWM7 567 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 SPNS2Q8IVW8 549 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 SYCE1Q8N0S2 351 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 CCDC89Q8N998 374 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 ABHD11Q8NFV4 315 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 OR2M7Q8NG81 312 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 HES6Q96HZ4 224 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 C18orf12Q96KH6 178 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 SMC6Q96SB8 1091 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 SMR3AQ99954 134 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 SGPP1Q9BX95 441 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 SYBUQ9NX95 663 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 CRIM1Q9NZV1 1036 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 KCMF1Q9P0J7 381 aa15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 ZNF223Q9UK11 482 aaPredicted RBP15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 HRNRQ86YZ3 2850 aaPredicted RBP15.57■□□□□ 0.08
CHCHD3-202ENST00000423635 NSD1Q96L73 2696 aaPredicted RBP15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 A6NNC1 897 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 A8MUA0 341 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 ACOT7O00154 380 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 EIF3FO00303 357 aaPredicted RBP15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 NDUFS4O43181 175 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 WDR1O75083 606 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 CDH1P12830 882 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 CCND1P24385 295 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 HOXC12P31275 282 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 NDUFAF5Q5TEU4 345 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 ZNF549Q6P9A3 640 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 AGTRAPQ6RW13 159 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 TRILQ7L0X0 811 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 STRA8Q7Z7C7 330 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 SLC22A16Q86VW1 577 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 WFDC11Q8NEX6 87 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 NT5CQ8TCD5 201 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 C1orf54Q8WWF1 131 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 ARSGQ96EG1 525 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 TTTY12Q9BZ98 90 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 ZFATQ9P243 1243 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 FBXW2Q9UKT8 454 aa15.56■□□□□ 0.08
CHCHD3-202ENST00000423635 FAM166BA8MTA8 275 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 AQP7O14520 342 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 CEP104O60308 925 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 B3GALT4O96024 378 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 PLGLB1Q02325 96 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 SNTB1Q13884 538 aaKnown RBP15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 DAZAP2Q15038 168 aaPredicted RBP15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 DEFB113Q30KQ7 82 aa15.55■□□□□ 0.08
CHCHD3-202ENST00000423635 ARMC3Q5W041 872 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms