RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 PRM3Q9NNZ6 103 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 DKK4Q9UBT3 224 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 NDOR1Q9UHB4 597 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.14■□□□□ 0.17
COL7A1-202ENST00000422991 FIS1Q9Y3D6 152 aa16.14■□□□□ 0.17
COL7A1-202ENST00000422991 SEC16AO15027 2179 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 SCN3AQ9NY46 2000 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 SERTM1A2A2V5 107 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 MEN1O00255 615 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 ERI3O43414 337 aaKnown RBP16.13■□□□□ 0.17
COL7A1-202ENST00000422991 SH3BGRLO75368 114 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 SEMA3DO95025 777 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 NSA2O95478 260 aaKnown RBP16.13■□□□□ 0.17
COL7A1-202ENST00000422991 IL1RNP18510 177 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 ALAS2P22557 587 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 PTX3P26022 381 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-202ENST00000422991 RAB8AP61006 207 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 CUL3Q13618 768 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 DEPDC1Q5TB30 811 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 PRMT9Q6P2P2 845 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 TRIM40Q6P9F5 258 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 ABHD17CQ6PCB6 329 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 C6orf15Q6UXA7 325 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-202ENST00000422991 CHSY3Q70JA7 882 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 PROSER1Q86XN7 944 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 PDSS2Q86YH6 399 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 HOMEZQ8IX15 550 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 METTL27Q8N6F8 245 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-202ENST00000422991 OR9A4Q8NGU2 314 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 MAGEB18Q96M61 343 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 DPH2Q9BQC3 489 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-202ENST00000422991 ACPTQ9BZG2 426 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 ANKHQ9HCJ1 492 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 DNAJC15Q9Y5T4 150 aa16.13■□□□□ 0.17
COL7A1-202ENST00000422991 APC2O95996 2303 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 A0A0A6YYC8 382 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-202ENST00000422991 SRRM3A6NNA2 597 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-202ENST00000422991 I3L1I5 382 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-202ENST00000422991 RAD1O60671 282 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 GALR3O60755 368 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-202ENST00000422991 KLHL18O94889 574 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 ONECUT2O95948 504 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 CHEK2O96017 543 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 B3GALT4O96024 378 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 PLA2G16P53816 162 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 TGM3Q08188 693 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 ABHD18Q0P651 414 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 DEFB134Q4QY38 66 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 SCIMPQ6UWF3 145 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 ZNF517Q6ZMY9 492 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-202ENST00000422991 RGS9BPQ6ZS82 235 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 TRIM46Q7Z4K8 759 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 UBE3DQ7Z6J8 389 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 DTX1Q86Y01 620 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 KIRREL3Q8IZU9 778 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 NLGN4XQ8N0W4 816 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 ESX1Q8N693 406 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 GBP7Q8N8V2 638 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-202ENST00000422991 SRFBP1Q8NEF9 429 aaKnown RBP16.12■□□□□ 0.17
COL7A1-202ENST00000422991 NLGN4YQ8NFZ3 816 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-202ENST00000422991 TWIST2Q8WVJ9 160 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 QRFPRQ96P65 431 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 KCNC2Q96PR1 638 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 C17orf62Q9BQA9 187 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 CENPKQ9BS16 269 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 TUBB1Q9H4B7 451 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 AKIRIN1Q9H9L7 192 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-202ENST00000422991 LHX9Q9NQ69 397 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 CDC14AQ9UNH5 594 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 SLC12A4Q9UP95 1085 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 NAALAD2Q9Y3Q0 740 aa16.12■□□□□ 0.17
COL7A1-202ENST00000422991 ANKRD11Q6UB99 2663 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-202ENST00000422991 A0A0G2JN53 185 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 SAP18O00422 153 aaKnown RBP16.11■□□□□ 0.17
COL7A1-202ENST00000422991 PLPP1O14494 284 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 KLK3P07288 261 aaPredicted RBP16.11■□□□□ 0.17
COL7A1-202ENST00000422991 LIPCP11150 499 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 STAT5AP42229 794 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 OR1D4P47884 311 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 AVPR1BP47901 424 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 RPL14P50914 215 aaKnown RBP16.11■□□□□ 0.17
COL7A1-202ENST00000422991 RAP1GDS1P52306 607 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 ARFIP1P53367 373 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 PCBP4P57723 403 aaKnown RBP16.11■□□□□ 0.17
COL7A1-202ENST00000422991 SKP1P63208 163 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 DCDP81605 110 aaKnown RBP16.11■□□□□ 0.17
COL7A1-202ENST00000422991 DSG2Q14126 1118 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 NKAIN1Q4KMZ8 207 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 LCN10Q6JVE6 187 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 NIPAL1Q6NVV3 410 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 FAM198BQ6UWH4 519 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 COX15Q7KZN9 410 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 AMER3Q8N944 861 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 SNIP1Q8TAD8 396 aaKnown RBP16.11■□□□□ 0.17
COL7A1-202ENST00000422991 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.11■□□□□ 0.17
COL7A1-202ENST00000422991 MR1Q95460 341 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 RGMAQ96B86 450 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 MMABQ96EY8 250 aaPredicted RBP16.11■□□□□ 0.17
COL7A1-202ENST00000422991 C7orf26Q96N11 449 aa16.11■□□□□ 0.17
COL7A1-202ENST00000422991 TBCDQ9BTW9 1192 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms