RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 NDUFA9Q16795 377 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 RBM44Q6ZP01 1051 aaKnown RBP20.49■□□□□ 0.87
ABCF3-202ENST00000421340 BPHLQ86WA6 291 aaPredicted RBP20.49■□□□□ 0.87
ABCF3-202ENST00000421340 LIX1Q8N485 282 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 ARHGEF39Q8N4T4 335 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 OR8K5Q8NH50 307 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 N4BP2L2Q92802 583 aaPredicted RBP20.49■□□□□ 0.87
ABCF3-202ENST00000421340 MACROD1Q9BQ69 325 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 TUBB6Q9BUF5 446 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 SYNDIG1Q9H7V2 258 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 FANCEQ9HB96 536 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 SERTAD3Q9UJW9 196 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 G3BP2Q9UN86 482 aaKnown RBP20.49■□□□□ 0.87
ABCF3-202ENST00000421340 POLR3HQ9Y535 204 aaPredicted RBP20.49■□□□□ 0.87
ABCF3-202ENST00000421340 CAPN7Q9Y6W3 813 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 MUC6Q6W4X9 2439 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 HEATR5BQ9P2D3 2071 aa20.49■□□□□ 0.87
ABCF3-202ENST00000421340 GOLGA4Q13439 2230 aaKnown RBP20.48■□□□□ 0.87
ABCF3-202ENST00000421340 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.48■□□□□ 0.87
ABCF3-202ENST00000421340 H3BMH7 237 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 KLK1P06870 262 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 FOLR1P15328 257 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 ALOX12P18054 663 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 SDC1P18827 310 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 CSRP1P21291 193 aaKnown RBP20.48■□□□□ 0.87
ABCF3-202ENST00000421340 JAK1P23458 1154 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 TPP2P29144 1249 aaPredicted RBP20.48■□□□□ 0.87
ABCF3-202ENST00000421340 PRDX6P30041 224 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 PLA2G16P53816 162 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 FAM53BQ14153 422 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 GRM7Q14831 915 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 HERC3Q15034 1050 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 HKDC1Q2TB90 917 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 CCNYL2Q5T2Q4 361 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 YOD1Q5VVQ6 348 aaPredicted RBP20.48■□□□□ 0.87
ABCF3-202ENST00000421340 CYB5D1Q6P9G0 228 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 GLB1L3Q8NCI6 653 aaPredicted RBP20.48■□□□□ 0.87
ABCF3-202ENST00000421340 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.48■□□□□ 0.87
ABCF3-202ENST00000421340 NETO1Q8TDF5 533 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 TSPEARQ8WU66 669 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 ZNF501Q96CX3 271 aaPredicted RBP20.48■□□□□ 0.87
ABCF3-202ENST00000421340 MARK4Q96L34 752 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 PHOX2BQ99453 314 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 CLK4Q9HAZ1 481 aaKnown RBP20.48■□□□□ 0.87
ABCF3-202ENST00000421340 ARMCX1Q9P291 453 aa20.48■□□□□ 0.87
ABCF3-202ENST00000421340 A0A0A6YYD5 115 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 ARHGAP10A1A4S6 786 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 SLC22A3O75751 556 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 KLHL18O94889 574 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 HIST1H1TP22492 207 aaPredicted RBP20.47■□□□□ 0.87
ABCF3-202ENST00000421340 ATP5A1P25705 553 aaKnown RBP20.47■□□□□ 0.87
ABCF3-202ENST00000421340 SSR2P43308 183 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 MTTPP55157 894 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 ZNF763Q0D2J5 394 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 KCNAB1Q14722 419 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 DEFB110Q30KQ9 67 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 FAM214AQ32MH5 1076 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 CDCP2Q5VXM1 449 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 TLDC1Q6P9B6 456 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 IKBIPQ70UQ0 350 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 PROKR1Q8TCW9 393 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 TEFMQ96QE5 360 aaKnown RBP20.47■□□□□ 0.87
ABCF3-202ENST00000421340 C17orf62Q9BQA9 187 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 FGF21Q9NSA1 209 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 TOR4AQ9NXH8 423 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 DNAH14Q0VDD8 3507 aa20.47■□□□□ 0.87
ABCF3-202ENST00000421340 LAMA1P25391 3075 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 GNG14A0A1W2PPG7 69 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 GUCY1B2O75343 617 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 EEDO75530 441 aaKnown RBP20.46■□□□□ 0.87
ABCF3-202ENST00000421340 DKK1O94907 266 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 STATHP02808 62 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 ZNF888P0CJ79 500 aaPredicted RBP20.46■□□□□ 0.87
ABCF3-202ENST00000421340 PRPS1L1P21108 318 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 PIK3R1P27986 724 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 CLNS1AP54105 237 aaKnown RBP20.46■□□□□ 0.87
ABCF3-202ENST00000421340 ITGA1P56199 1179 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 SKP1P63208 163 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 MAPRE2Q15555 327 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 PHF19Q5T6S3 580 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 ACOT4Q8N9L9 421 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 TTC29Q8NA56 475 aaPredicted RBP20.46■□□□□ 0.87
ABCF3-202ENST00000421340 AGBL5Q8NDL9 886 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 C16orf78Q8WTQ4 265 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 STARD8Q92502 1023 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 CMTM5Q96DZ9 223 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 SERINC2Q96SA4 455 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 SPRTNQ9H040 489 aaPredicted RBP20.46■□□□□ 0.87
ABCF3-202ENST00000421340 ACTL8Q9H568 366 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 MYNNQ9NPC7 610 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 SIDT1Q9NXL6 827 aaKnown RBP20.46■□□□□ 0.87
ABCF3-202ENST00000421340 BAIAP2L1Q9UHR4 511 aa20.46■□□□□ 0.87
ABCF3-202ENST00000421340 ASXL3Q9C0F0 2248 aa20.45■□□□□ 0.86
ABCF3-202ENST00000421340 DYTNA2CJ06 578 aa20.45■□□□□ 0.86
ABCF3-202ENST00000421340 HYKKA2RU49 373 aa20.45■□□□□ 0.86
ABCF3-202ENST00000421340 TMEM150CB9EJG8 249 aa20.45■□□□□ 0.86
ABCF3-202ENST00000421340 C4orf51C9J302 202 aa20.45■□□□□ 0.86
ABCF3-202ENST00000421340 RTCAO00442 366 aaKnown RBP20.45■□□□□ 0.86
ABCF3-202ENST00000421340 TM4SF5O14894 197 aa20.45■□□□□ 0.86
ABCF3-202ENST00000421340 OR2B3O76000 313 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms