RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 ZDHHC1Q8WTX9 485 aa20■□□□□ 0.79
GPC1-202ENST00000420138 CCDC115Q96NT0 180 aa20■□□□□ 0.79
GPC1-202ENST00000420138 NR1H4Q96RI1 486 aaPredicted RBP20■□□□□ 0.79
GPC1-202ENST00000420138 MACROD1Q9BQ69 325 aa20■□□□□ 0.79
GPC1-202ENST00000420138 KLHL31Q9H511 634 aa20■□□□□ 0.79
GPC1-202ENST00000420138 KAT8Q9H7Z6 458 aaKnown RBP20■□□□□ 0.79
GPC1-202ENST00000420138 ACTR10Q9NZ32 417 aa20■□□□□ 0.79
GPC1-202ENST00000420138 RIMS3Q9UJD0 308 aa20■□□□□ 0.79
GPC1-202ENST00000420138 TDRD6O60522 2096 aaKnown RBP20■□□□□ 0.79
GPC1-202ENST00000420138 OR2A25A4D2G3 310 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 FAM221BA6H8Z2 402 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 TNFSF14O43557 240 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 STATHP02808 62 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 IL3P08700 152 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 GSTM2P28161 218 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 GZMMP51124 257 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 C2orf80Q0P641 193 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 GRAMD1BQ3KR37 738 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 IKBIPQ70UQ0 350 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 SPPL2CQ8IUH8 684 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 MFSD9Q8NBP5 474 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 MUC13Q9H3R2 512 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 COPS7BQ9H9Q2 264 aaPredicted RBP19.99■□□□□ 0.79
GPC1-202ENST00000420138 PCDHB3Q9Y5E6 796 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 SNX13Q9Y5W8 968 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 CAPN5O15484 640 aaPredicted RBP19.99■□□□□ 0.79
GPC1-202ENST00000420138 NCK1P16333 377 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 EFNA1P20827 205 aaPredicted RBP19.99■□□□□ 0.79
GPC1-202ENST00000420138 CCNYL2Q5T2Q4 361 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 ZNF551Q7Z340 670 aaPredicted RBP19.99■□□□□ 0.79
GPC1-202ENST00000420138 CALHM3Q86XJ0 350 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 LILRA2Q8N149 483 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 CATSPER1Q8NEC5 780 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 OR10A6Q8NH74 314 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 OR10G6Q8NH81 332 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 RGMAQ96B86 450 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 TM4SF18Q96CE8 201 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 GBP5Q96PP8 586 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 TEFMQ96QE5 360 aaKnown RBP19.99■□□□□ 0.79
GPC1-202ENST00000420138 PANX1Q96RD7 426 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 THUMPD3Q9BV44 507 aaKnown RBP19.99■□□□□ 0.79
GPC1-202ENST00000420138 BHLHE41Q9C0J9 482 aaPredicted RBP19.99■□□□□ 0.79
GPC1-202ENST00000420138 DUSP15Q9H1R2 295 aaPredicted RBP19.99■□□□□ 0.79
GPC1-202ENST00000420138 DDX31Q9H8H2 851 aaKnown RBP19.99■□□□□ 0.79
GPC1-202ENST00000420138 SH3BP4Q9P0V3 963 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 BTNL2Q9UIR0 455 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 DTNAQ9Y4J8 743 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 NCOR1O75376 2440 aa19.99■□□□□ 0.79
GPC1-202ENST00000420138 GON4LQ3T8J9 2241 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 AQP12BA6NM10 295 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 TMPRSS11DO60235 418 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 MAGP20916 626 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 SOX11P35716 441 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 LSSP48449 732 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 AQP4P55087 323 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 SLC14A1Q13336 389 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 FCRL6Q6DN72 434 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 FBXO42Q6P3S6 717 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 TMEM26Q6ZUK4 368 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 GPR155Q7Z3F1 870 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 VN1R4Q7Z5H5 301 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 C1orf210Q8IVY1 113 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 AQP12AQ8IXF9 295 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 ZNF548Q8NEK5 533 aaPredicted RBP19.98■□□□□ 0.79
GPC1-202ENST00000420138 MS4A6EQ96DS6 147 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 FCRL4Q96PJ5 515 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 PRPF18Q99633 342 aaKnown RBP19.98■□□□□ 0.79
GPC1-202ENST00000420138 SH3GL1Q99961 368 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 EVA1BQ9NVM1 165 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 ADAM29Q9UKF5 820 aa19.98■□□□□ 0.79
GPC1-202ENST00000420138 ARHGEF17Q96PE2 2063 aaPredicted RBP19.97■□□□□ 0.79
GPC1-202ENST00000420138 TCRBV5S2A0A599 114 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 MAGEA13PA6NCF6 341 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 B4DGG1 531 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 RNASET2O00584 256 aaKnown RBP19.97■□□□□ 0.79
GPC1-202ENST00000420138 SERPIND1P05546 499 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 HHEXQ03014 270 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 TMEM35AQ53FP2 167 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 OR4C11Q6IEV9 310 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 ZNF793Q6ZN11 406 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 PAGE2Q7Z2X7 111 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 NUDT13Q86X67 352 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 ZNF761Q86XN6 746 aaPredicted RBP19.97■□□□□ 0.79
GPC1-202ENST00000420138 DTWD1Q8N5C7 304 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 ICA1LQ8NDH6 482 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 TRPV3Q8NET8 790 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 ADCY4Q8NFM4 1077 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 GATA6Q92908 595 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 MTERF3Q96E29 417 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 PHF12Q96QT6 1004 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 PKP2Q99959 881 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 RPF2Q9H7B2 306 aaKnown RBP19.97■□□□□ 0.79
GPC1-202ENST00000420138 AP4S1Q9Y587 144 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 KLK4Q9Y5K2 254 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 HEATR5BQ9P2D3 2071 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 A0A0A6YYD5 115 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 GSAPA4D1B5 854 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 EIF4E1BA6NMX2 242 aaKnown RBP19.97■□□□□ 0.79
GPC1-202ENST00000420138 TDGF1P13385 188 aa19.97■□□□□ 0.79
GPC1-202ENST00000420138 UQCRBP14927 111 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms