RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ABHD17BQ5VST6 288 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 ADNP2Q6IQ32 1131 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 FAM180AQ6UWF9 173 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 MAATS1Q7Z4T9 603 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 VN1R5Q7Z5H4 357 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 CRLF3Q8IUI8 442 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.37□□□□□ -0.75
SSBP3-206ENST00000420121 BEST3Q8N1M1 668 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 BCORP1Q8N888 145 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 MDS2Q8NDY4 140 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 M1APQ8TC57 530 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 FBXO25Q8TCJ0 367 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 ELP5Q8TE02 316 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 NR4A3Q92570 626 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 ESAMQ96AP7 390 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 CPNE1Q99829 537 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 EGFL8Q99944 293 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 PHACTR1Q9C0D0 580 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 MMP25Q9NPA2 562 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 OLAHQ9NV23 265 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 STMN3Q9NZ72 180 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 ASB1Q9Y576 335 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 CLDN16Q9Y5I7 305 aa10.37□□□□□ -0.75
SSBP3-206ENST00000420121 NCF1BA6NI72 391 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 A8MUI8 341 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 NCF1CA8MVU1 366 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 FAM227AF5H4B4 570 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 PRAMEF2O60811 474 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 STSP08842 583 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 CCDC166P0CW27 439 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 C1GALT1C1LP0DN25 315 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 NCF1P14598 390 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 GNAZP19086 355 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 CD22P20273 847 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 COL8A1P27658 744 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 HNRNPH1P31943 449 aaKnown RBP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 GP5P40197 560 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 HNF4AP41235 474 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 DLG1Q12959 904 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 TUBA3CQ13748 450 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 ELOAQ14241 798 aaKnown RBP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 SLBPQ14493 270 aaKnown RBP eCLIP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 RBBP5Q15291 538 aaKnown RBP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 EXT1Q16394 746 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 KBTBD12Q3ZCT8 623 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 C4orf17Q53FE4 359 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 TOR1AIP1Q5JTV8 583 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 TUBA3EQ6PEY2 450 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 SYT10Q6XYQ8 523 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 QSOX2Q6ZRP7 698 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 C3orf62Q6ZUJ4 267 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 ABHD13Q7L211 337 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 MAMDC2Q7Z304 686 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 CA13Q8N1Q1 262 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 KIF2BQ8N4N8 673 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 TBC1D19Q8N5T2 526 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 NFAM1Q8NET5 270 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 TRPV3Q8NET8 790 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 ANP32BQ92688 251 aaKnown RBP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 C5orf34Q96MH7 638 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 QRFPRQ96P65 431 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 SIGLEC12Q96PQ1 595 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 LPAR4Q99677 370 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 HES7Q9BYE0 225 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 CLK4Q9HAZ1 481 aaKnown RBP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 NECTIN3Q9NQS3 549 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 ZNF490Q9ULM2 529 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 OSGIN2Q9Y236 505 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 NCOA6Q14686 2063 aaPredicted RBP10.36□□□□□ -0.75
SSBP3-206ENST00000420121 LRBAP50851 2863 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 PCNX1Q96RV3 2341 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 GTF3C1Q12789 2109 aa10.36□□□□□ -0.75
SSBP3-206ENST00000420121 EML6Q6ZMW3 1958 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 TCRBV16S1A1N1A0A5B0 115 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 LRIT2A6NDA9 550 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 TGFBR3LH3BV60 316 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 LRRTM2O43300 516 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 B4GALT2O60909 372 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 GSTA2P09210 222 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 SLC35E2BP0CK96 405 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 MAOAP21397 527 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 JAK1P23458 1154 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 CASQ1P31415 396 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 CD96P40200 585 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 HSPA7P48741 367 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 HNRNPFP52597 415 aaKnown RBP10.35□□□□□ -0.75
SSBP3-206ENST00000420121 PLTPP55058 493 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 KCNK10P57789 538 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 OR4D2P58180 307 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 RAB10P61026 200 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 PMP22Q01453 160 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 ILF2Q12905 390 aaKnown RBP10.35□□□□□ -0.75
SSBP3-206ENST00000420121 RUNX2Q13950 521 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 E2F2Q14209 437 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 EFTUD2Q15029 972 aaKnown RBP eCLIP10.35□□□□□ -0.755e-7■■■■■ 41.1
SSBP3-206ENST00000420121 ADPRMQ3LIE5 342 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 CDKL4Q5MAI5 379 aa10.35□□□□□ -0.75
SSBP3-206ENST00000420121 UBAP2Q5T6F2 1119 aaKnown RBP10.35□□□□□ -0.75
SSBP3-206ENST00000420121 ZNF468Q5VIY5 522 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms