RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 MMP21Q8N119 569 aa13.28□□□□□ -0.28
NFE4-201ENST00000420058 EEF1AKMT1Q8WVE0 214 aa13.28□□□□□ -0.28
NFE4-201ENST00000420058 TMEM125Q96AQ2 219 aa13.28□□□□□ -0.28
NFE4-201ENST00000420058 SMIM10Q96HG1 83 aa13.28□□□□□ -0.28
NFE4-201ENST00000420058 OR4K3Q96R72 315 aa13.28□□□□□ -0.28
NFE4-201ENST00000420058 FOXC2Q99958 501 aa13.28□□□□□ -0.28
NFE4-201ENST00000420058 ZNF559Q9BR84 538 aa13.28□□□□□ -0.28
NFE4-201ENST00000420058 AICDAQ9GZX7 198 aa13.28□□□□□ -0.28
NFE4-201ENST00000420058 DEFB127Q9H1M4 99 aa13.28□□□□□ -0.28
NFE4-201ENST00000420058 SPNS1Q9H2V7 528 aa13.28□□□□□ -0.28
NFE4-201ENST00000420058 TP63Q9H3D4 680 aaPredicted RBP13.28□□□□□ -0.28
NFE4-201ENST00000420058 VPS9D1Q9Y2B5 631 aa13.28□□□□□ -0.28
NFE4-201ENST00000420058 KLF13Q9Y2Y9 288 aaPredicted RBP13.28□□□□□ -0.28
NFE4-201ENST00000420058 CLDN16Q9Y5I7 305 aa13.28□□□□□ -0.28
NFE4-201ENST00000420058 FAM237BA0A1B0GVD1 139 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 CTAGE9A4FU28 777 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 TMEM200CA6NKL6 621 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 A8MUA0 341 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 C4orf51C9J302 202 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 KLK8O60259 260 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 CDC40O60508 579 aaKnown RBP eCLIP13.27□□□□□ -0.29
NFE4-201ENST00000420058 PRMT3O60678 531 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 SLC35G6P0C7Q6 338 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 SLC1A2P43004 574 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 GPR85P60893 370 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 HYAL2Q12891 473 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 PWP1Q13610 501 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 DHX34Q14147 1143 aaKnown RBP13.27□□□□□ -0.29
NFE4-201ENST00000420058 PHKG1Q16816 387 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 GXYLT1Q4G148 440 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 ARHGAP11AQ6P4F7 1023 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 C16orf47Q6ZP98 133 aaPredicted RBP13.27□□□□□ -0.29
NFE4-201ENST00000420058 LIX1LQ8IVB5 337 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 RNF10Q8N5U6 811 aaKnown RBP13.27□□□□□ -0.29
NFE4-201ENST00000420058 UTP15Q8TED0 518 aaKnown RBP13.27□□□□□ -0.29
NFE4-201ENST00000420058 DEFB126Q9BYW3 111 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 TSGA10Q9BZW7 698 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 GSX1Q9H4S2 264 aaPredicted RBP13.27□□□□□ -0.29
NFE4-201ENST00000420058 DLL4Q9NR61 685 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 CCM2LQ9NUG4 571 aaPredicted RBP13.27□□□□□ -0.29
NFE4-201ENST00000420058 ZNF358Q9NW07 568 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 ZFATQ9P243 1243 aa13.27□□□□□ -0.29
NFE4-201ENST00000420058 PPIEQ9UNP9 301 aaKnown RBP13.27□□□□□ -0.29
NFE4-201ENST00000420058 EIF3FO00303 357 aaPredicted RBP13.26□□□□□ -0.29
NFE4-201ENST00000420058 NDUFS4O43181 175 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 OR1F1O43749 312 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 PRKNO60260 465 aaPredicted RBP13.26□□□□□ -0.29
NFE4-201ENST00000420058 CEP104O60308 925 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 CTAG2O75638 210 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 ZNF888P0CJ79 500 aaPredicted RBP13.26□□□□□ -0.29
NFE4-201ENST00000420058 TERF1P54274 439 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 XKR6Q5GH73 641 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 CATSPEREQ5SY80 951 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 ARMC3Q5W041 872 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 CES4AQ5XG92 561 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 RTL6Q6ICC9 239 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 STRA8Q7Z7C7 330 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 TMEM200AQ86VY9 491 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 NT5CQ8TCD5 201 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 PYCR2Q96C36 320 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 BAG1Q99933 345 aaPredicted RBP13.26□□□□□ -0.29
NFE4-201ENST00000420058 AARSD1Q9BTE6 412 aaKnown RBP13.26□□□□□ -0.29
NFE4-201ENST00000420058 KLHL31Q9H511 634 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 ZDHHC11Q9H8X9 412 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 PARVBQ9HBI1 364 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 PNPLA3Q9NST1 481 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 RPH3AQ9Y2J0 694 aaPredicted RBP13.26□□□□□ -0.29
NFE4-201ENST00000420058 L3MBTL1Q9Y468 752 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 FAM215AQ9Y5M1 114 aa13.26□□□□□ -0.29
NFE4-201ENST00000420058 A0A0G2JMM0 328 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 A0A1W2PPB8 328 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 A0A1W2PRS3 328 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 TRBC2A0A5B9 178 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 USP27XA6NNY8 438 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 KIR3DP1A8MWS1 328 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 TGFBR3LH3BV60 316 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 FCHO1O14526 889 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 ITGA10O75578 1167 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 KLK2P20151 261 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 JAK1P23458 1154 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 GABRB3P28472 473 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 SCTRP47872 440 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 CCR8P51685 355 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 TRIP13Q15645 432 aaPredicted RBP13.25□□□□□ -0.29
NFE4-201ENST00000420058 CYP4Z2PQ8N1L4 340 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 ANKRD53Q8N9V6 530 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 OR56A3Q8NH54 315 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 ZNF669Q96BR6 464 aaPredicted RBP13.25□□□□□ -0.29
NFE4-201ENST00000420058 ALKBH8Q96BT7 664 aaKnown RBP13.25□□□□□ -0.29
NFE4-201ENST00000420058 SNF8Q96H20 258 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 SLC6A16Q9GZN6 736 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 PRDM9Q9NQV7 894 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 FBXO5Q9UKT4 447 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 MPDZO75970 2070 aa13.25□□□□□ -0.29
NFE4-201ENST00000420058 ZANQ9Y493 2812 aa13.24□□□□□ -0.29
NFE4-201ENST00000420058 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.24□□□□□ -0.29
NFE4-201ENST00000420058 TRBV11-1A0A0K0K1C0 115 aa13.24□□□□□ -0.29
NFE4-201ENST00000420058 MAGEB16A2A368 324 aa13.24□□□□□ -0.29
NFE4-201ENST00000420058 SDR42E2A6NKP2 422 aa13.24□□□□□ -0.29
NFE4-201ENST00000420058 NPIPA2E9PIF3 369 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms