RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TRAV34A0A0B4J273 112 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 ARHGEF37A1IGU5 675 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 ARHGEF33A8MVX0 844 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 ANHXE9PGG2 379 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 NPIPA3F8WFD2 350 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 K7EQG2 157 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 ST8SIA3O43173 380 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 PRDM1O75626 825 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 SIX3O95343 332 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 HSPA4LO95757 839 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 MOCS2O96007 188 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 TSPY3P0CV98 308 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 TSPY8P0CW00 308 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 PCP11498 1178 aaKnown RBP3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 IFNAR1P17181 557 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 SRD5A2P31213 254 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 CSRP3P50461 194 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 ABCE1P61221 599 aaKnown RBP3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 TSPY1Q01534 308 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 TFCP2Q12800 502 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 ITPK1Q13572 414 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 GRB14Q14449 540 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 ZNF841Q6ZN19 808 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 Q6ZVQ6 151 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 SPATA21Q7Z572 469 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 KCNMB4Q86W47 210 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 CARM1Q86X55 608 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 ERC1Q8IUD2 1116 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 PHC2Q8IXK0 858 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 TIGD4Q8IY51 512 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 THNSL1Q8IYQ7 743 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 OR5M9Q8NGP3 310 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 SLC26A7Q8TE54 656 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 CORO2AQ92828 525 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 BSCL2Q96G97 398 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 TSSK2Q96PF2 358 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 RAB3IPQ96QF0 476 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 FERMT1Q9BQL6 677 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 CHCHD5Q9BSY4 110 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 PAPOLGQ9BWT3 736 aaKnown RBP3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 PUS3Q9BZE2 481 aaKnown RBP3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 ADNPQ9H2P0 1102 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 UBQLN3Q9H347 655 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 ZNF318Q5VUA4 2279 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 ADAMTS9Q9P2N4 1935 aa3.52□□□□□ -1.85
HMGB1P49-201ENST00000418882 RALGAPA1Q6GYQ0 2036 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 NKX6-3A6NJ46 265 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 SRRM4A7MD48 611 aaKnown RBP3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 ZNF732B4DXR9 585 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 PHF1O43189 567 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 C9P02748 559 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 GIFP27352 417 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 FEN1P39748 380 aaKnown RBP3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 EVCP57679 992 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 FOLH1Q04609 750 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 SIX1Q15475 284 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 MLF2Q15773 248 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 CCDC184Q52MB2 194 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 MEX3DQ86XN8 651 aaKnown RBP3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 HPS6Q86YV9 775 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 LINC00612Q8N6U2 182 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 SPPL2AQ8TCT8 520 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 DPEP2Q9H4A9 486 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 C3orf14Q9HBI5 128 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 PFDN4Q9NQP4 134 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 MRGBPQ9NV56 204 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 NCKAP1Q9Y2A7 1128 aa3.51□□□□□ -1.85
HMGB1P49-201ENST00000418882 A0A0B4J203 849 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 TRAFD1O14545 582 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 TNFSF12O43508 249 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 BCL2L11O43521 198 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 VIMP08670 466 aaKnown RBP3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 ITIH1P19827 911 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 KCNJ1P48048 391 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 KHKP50053 298 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 FCHO2Q0JRZ9 810 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 RIGQ13278 110 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 SHQ1Q6PI26 577 aaKnown RBP3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 C17orf107Q6ZR85 190 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 CDHR3Q6ZTQ4 885 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 SLC25A42Q86VD7 318 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 CCDC185Q8N715 623 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 UXS1Q8NBZ7 420 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 SETD6Q8TBK2 473 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 GRK7Q8WTQ7 553 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 SGF29Q96ES7 293 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 PCDHB18PQ96TA0 734 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 PRMT1Q99873 361 aaKnown RBP3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 EDEM3Q9BZQ6 932 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 RPF1Q9H9Y2 349 aaKnown RBP3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 ZCCHC17Q9NP64 241 aaKnown RBP3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 TMOD3Q9NYL9 352 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 PCDHGA1Q9Y5H4 931 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 POMT1Q9Y6A1 747 aa3.5□□□□□ -1.85
HMGB1P49-201ENST00000418882 ANKDD1BA6NHY2 528 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 MTRF1O75570 445 aaKnown RBP3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 CALCAP01258 141 aa3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 RPN1P04843 607 aaKnown RBP3.49□□□□□ -1.85
HMGB1P49-201ENST00000418882 PKLRP30613 574 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms