RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 GLYATL1P3A0A0U1RQE8 302 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 EXOC1LA0A1B0GW35 172 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 IGLON5A6NGN9 336 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 OR51F1A6NGY5 319 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 LRRC72A6NJI9 287 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 GOLGA8KD6RF30 607 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 GOLGA8TH3BQL2 631 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 H7C1Q1 480 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 GAPDHSO14556 408 aaPredicted RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 MAP2K7O14733 419 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ATP8B1O43520 1251 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SH3BP5O60239 455 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ZNF217O75362 1048 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 TM7SF2O76062 418 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SRP72O76094 671 aaKnown RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 RECQL5O94762 991 aaPredicted RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SEMA4FO95754 770 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SHBGP04278 402 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 IVLP07476 585 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 HOXA6P31267 233 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 FOXN2P32314 431 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ACSL1P33121 698 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 GDF5P43026 501 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 EIF3BP55884 814 aaKnown RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 FOXL2P58012 376 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 TAS2R50P59544 299 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 DCDC1P59894 354 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 RPS21P63220 83 aaKnown RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 CACNG1Q06432 222 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 IFFO1Q0D2I5 559 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SGCGQ13326 291 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 NAB1Q13506 487 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 PEX6Q13608 980 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 CHRNA6Q15825 494 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 KLHL38Q2WGJ6 581 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 GPR33Q49SQ1 333 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 FASTKD1Q53R41 847 aaKnown RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ZRANB3Q5FWF4 1079 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 TMEM31Q5JXX7 168 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ZNF470Q6ECI4 717 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 TMEM65Q6PI78 240 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 FAM151BQ6UXP7 276 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 KYAT3Q6YP21 454 aaKnown RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 DCDC5Q6ZRR9 648 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SNX20Q7Z614 316 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 PTAR1Q7Z6K3 402 aaPredicted RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SDCCAG8Q86SQ7 713 aaPredicted RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 HORMAD1Q86X24 394 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 LRRC6Q86X45 466 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 CPOQ8IVL8 374 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 CNTN4Q8IWV2 1026 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 CTAGE3PQ8IX95 158 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 LMNTD2Q8IXW0 634 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 GPR150Q8NGU9 434 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 OR2T34Q8NGX1 318 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 GABPB2Q8TAK5 448 aaPredicted RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ZNF398Q8TD17 642 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SLC2A12Q8TD20 617 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 DTX3LQ8TDB6 740 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SLC44A1Q8WWI5 657 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ASB12Q8WXK4 309 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 AKAP1Q92667 903 aaKnown RBP eCLIP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 REPS1Q96D71 796 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 DTD2Q96FN9 168 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 AGAP2Q99490 1192 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 TMEM109Q9BVC6 243 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 RIOK2Q9BVS4 552 aaKnown RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SPATA16Q9BXB7 569 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SLC17A9Q9BYT1 436 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ROPN1BQ9BZX4 212 aaPredicted RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ABCG8Q9H221 673 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 VIPAS39Q9H9C1 493 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ROPN1Q9HAT0 212 aaPredicted RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 CD93Q9NPY3 652 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SMYD2Q9NRG4 433 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ZNF446Q9NWS9 450 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ASB6Q9NWX5 421 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 NSMCE4AQ9NXX6 385 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SEMA5BQ9P283 1151 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 MARCH4Q9P2E8 410 aaPredicted RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 NFKBIL1Q9UBC1 381 aaPredicted RBP5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 FETUBQ9UGM5 382 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 SLC24A2Q9UI40 661 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 CD84Q9UIB8 345 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 ADAM21Q9UKJ8 722 aa5.72□□□□□ -1.49
NIFKP3-201ENST00000417799 COL6A3P12111 3177 aa5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 IGHV1OR15-9A0A0B4J2B8 117 aa5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 TRBV5-4A0A0C4DH59 114 aa5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 PRR23AA6NEV1 266 aa5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 FAM47DPA6NHR8 397 aa5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 AGAP14A8MT82 685 aa5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 TARM1B6A8C7 271 aa5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 C10orf142B7Z368 130 aa5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 POC1B-GALNT4F8VUJ3 575 aa5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 RASGRF2O14827 1237 aa5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 PFDN6O15212 129 aa5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 HNRNPRO43390 633 aaKnown RBP5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 UGT1A9O60656 530 aa5.71□□□□□ -1.5
NIFKP3-201ENST00000417799 PIAS1O75925 651 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms