RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 MAN1A2O60476 641 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 PRMT3O60678 531 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 PRAMEF2O60811 474 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 NCF1P14598 390 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-210ENST00000416778 STMN1P16949 149 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 GP5P40197 560 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 MAGEA4P43358 317 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 OR4D2P58180 307 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 ATP6V0D1P61421 351 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 OR4D1Q15615 310 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 ZKSCAN8Q15776 578 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-210ENST00000416778 GRTP1Q5TC63 336 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 TMIGD1Q6UXZ0 262 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 FRA10AC1Q70Z53 315 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 ZNF572Q7Z3I7 529 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-210ENST00000416778 ESAMQ96AP7 390 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 MAGEB10Q96LZ2 347 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-210ENST00000416778 C5orf34Q96MH7 638 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 PTCHD1Q96NR3 888 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 LPAR4Q99677 370 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 PHACTR1Q9C0D0 580 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 OLAHQ9NV23 265 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 TXNDC16Q9P2K2 825 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 PTBP2Q9UKA9 531 aaKnown RBP16.79■□□□□ 0.28
CPNE1-210ENST00000416778 ZNF490Q9ULM2 529 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-210ENST00000416778 OSGIN2Q9Y236 505 aa16.79■□□□□ 0.28
CPNE1-210ENST00000416778 NOTCH2Q04721 2471 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 LRIT2A6NDA9 550 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 LRRTM2O43300 516 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 FAM155BO75949 473 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 CLDN1O95832 211 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 TBX6O95947 436 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-210ENST00000416778 UQCRHP07919 91 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 MYBL2P10244 700 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 JAK1P23458 1154 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 SPRP35270 261 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-210ENST00000416778 CD96P40200 585 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 TDGF1P3P51864 188 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 SLC26A5P58743 744 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 BTN3A2P78410 334 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 RUNX2Q13950 521 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 INAQ16352 499 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 MEP1AQ16819 746 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 KBTBD12Q3ZCT8 623 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 TOR1AIP1Q5JTV8 583 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 SULT1C3Q6IMI6 304 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 QSOX2Q6ZRP7 698 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 CRLF3Q8IUI8 442 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 BEST3Q8N1M1 668 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 TCAIMQ8N3R3 496 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 DNAJB8Q8NHS0 232 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 ELP5Q8TE02 316 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 KIAA1191Q96A73 305 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 TMEM79Q9BSE2 394 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 GPRC5BQ9NZH0 403 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 SVILO95425 2214 aa16.78■□□□□ 0.28
CPNE1-210ENST00000416778 TEX15Q9BXT5 2789 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 IGKV3D-11A0A0A0MRZ8 115 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 A1L4Q6 167 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 STK16O75716 305 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 WISP2O76076 250 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 RASAL1O95294 804 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 STSP08842 583 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 RNH1P13489 461 aaKnown RBP16.77■□□□□ 0.28
CPNE1-210ENST00000416778 MST1P26927 711 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 GMPRP36959 345 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 RAB10P61026 200 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 SRSF11Q05519 484 aaKnown RBP16.77■□□□□ 0.28
CPNE1-210ENST00000416778 TUBA3CQ13748 450 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 SLBPQ14493 270 aaKnown RBP eCLIP16.77■□□□□ 0.28
CPNE1-210ENST00000416778 FBXO48Q5FWF7 155 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 TUBA3EQ6PEY2 450 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 VN1R5Q7Z5H4 357 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 ISCA2Q86U28 154 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 CTAGE3PQ8IX95 158 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 CA13Q8N1Q1 262 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 PPM1NQ8N819 430 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 NFAM1Q8NET5 270 aaPredicted RBP16.77■□□□□ 0.28
CPNE1-210ENST00000416778 TTLQ8NG68 377 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 SUN3Q8TAQ9 357 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 FBF1Q8TES7 1133 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 NR4A3Q92570 626 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 MS4A6EQ96DS6 147 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 WDR34Q96EX3 536 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 SEC16BQ96JE7 1060 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 PITHD1Q9GZP4 211 aaPredicted RBP16.77■□□□□ 0.28
CPNE1-210ENST00000416778 RAB17Q9H0T7 212 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 EHD1Q9H4M9 534 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 NECTIN3Q9NQS3 549 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 DNAJC11Q9NVH1 559 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 ABI3Q9P2A4 366 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 PCDHGB6Q9Y5F9 930 aa16.77■□□□□ 0.28
CPNE1-210ENST00000416778 TCRBV16S1A1N1A0A5B0 115 aa16.76■□□□□ 0.27
CPNE1-210ENST00000416778 MAOAP21397 527 aa16.76■□□□□ 0.27
CPNE1-210ENST00000416778 HNRNPH1P31943 449 aaKnown RBP16.76■□□□□ 0.27
CPNE1-210ENST00000416778 HSPA7P48741 367 aa16.76■□□□□ 0.27
CPNE1-210ENST00000416778 ST13P50502 369 aaKnown RBP16.76■□□□□ 0.27
CPNE1-210ENST00000416778 STXBP1P61764 594 aaKnown RBP16.76■□□□□ 0.27
CPNE1-210ENST00000416778 DLG1Q12959 904 aa16.76■□□□□ 0.27
CPNE1-210ENST00000416778 ADPRMQ3LIE5 342 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms