RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 FAM76AQ8TAV0 307 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 THAP3Q8WTV1 239 aaPredicted RBP12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 NUDT8Q8WV74 236 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 HAS2Q92819 552 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 FKBP10Q96AY3 582 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 RAD51AP1Q96B01 352 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 WWP1Q9H0M0 922 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 ALG9Q9H6U8 611 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 WDR54Q9H977 334 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 COQ3Q9NZJ6 369 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 SPTBP11277 2137 aa12.85□□□□□ -0.35
RAPGEF1-204ENST00000414781 FAM171A2A8MVW0 826 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 CDC7O00311 574 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 BIRC5O15392 142 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 PRAMEF2O60811 474 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 KLHL18O94889 574 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 MYL2P10916 166 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 ST6GAL1P15907 406 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 POLR2CP19387 275 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 HNMTP50135 292 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 NAA20P61599 178 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 CDKL1Q00532 357 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 TSNQ15631 228 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 CEBPEQ15744 281 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 TECRLQ5HYJ1 363 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 KIRREL2Q6UWL6 708 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 CDHR3Q6ZTQ4 885 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 SPPL2CQ8IUH8 684 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 SLC22A9Q8IVM8 553 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 DCUN1D3Q8IWE4 304 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 TCAIMQ8N3R3 496 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 LILRA3Q8N6C8 439 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 ANKRD42Q8N9B4 389 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 CFAP61Q8NHU2 1237 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 SUN3Q8TAQ9 357 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 ATL1Q8WXF7 558 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 NRGNQ92686 78 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 ARSGQ96EG1 525 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 C18orf12Q96KH6 178 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 CCDC138Q96M89 665 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 C12orf66Q96MD2 445 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 FAM111AQ96PZ2 611 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 FERD3LQ96RJ6 166 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 XPR1Q9UBH6 696 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 ST6GALNAC2Q9UJ37 374 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 PSMD13Q9UNM6 376 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 MRPS2Q9Y399 296 aaKnown RBP12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 OARD1Q9Y530 152 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 HS3ST3B1Q9Y662 390 aa12.84□□□□□ -0.35
RAPGEF1-204ENST00000414781 NPEPPSL1A6NEC2 478 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 ZNF839A8K0R7 811 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 H3BQF6 201 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 ZSCAN9O15535 394 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 C1orf105O95561 183 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 ALBP02768 609 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 PROCP04070 461 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 HEXAP06865 529 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 ANXA5P08758 320 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 NEFHP12036 1026 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 ATP5F1P24539 256 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 ADSLP30566 484 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 ADAM8P78325 824 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 SLC9A5Q14940 896 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 KRTCAP3Q53RY4 240 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 TMEM198Q66K66 360 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 CLEC9AQ6UXN8 241 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 Q71RC1 249 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 TRIM42Q8IWZ5 723 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 ARMC2Q8NEN0 867 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 OR5K2Q8NHB8 316 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 DENND1AQ8TEH3 1009 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 SDCCAG3Q96C92 435 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 INSM2Q96T92 566 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 INTS9Q9NV88 658 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 ZNF358Q9NW07 568 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 ARL15Q9NXU5 204 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 NUDT4Q9NZJ9 180 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 CD274Q9NZQ7 290 aa12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 CPSF2Q9P2I0 782 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 TSR3Q9UJK0 312 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 NXT1Q9UKK6 140 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 TNPO3Q9Y5L0 923 aaKnown RBP12.83□□□□□ -0.36
RAPGEF1-204ENST00000414781 SUPT3HB4E1H0 165 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 E9PLN8 166 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 SUPT3HO75486 399 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 HPP00738 406 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 PIM1P11309 404 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 GFAPP14136 432 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 ITGAXP20702 1163 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 DNASE1P24855 282 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 PRDX3P30048 256 aaKnown RBP12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 SOX11P35716 441 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 ETV4P43268 484 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 ALDH18A1P54886 795 aaKnown RBP12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 FOXL2P58012 376 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 ARHGAP19Q14CB8 494 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 TGFBIQ15582 683 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 OR4D1Q15615 310 aa12.82□□□□□ -0.36
RAPGEF1-204ENST00000414781 RBBP7Q16576 425 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms