RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CNTFP26441 200 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 KCNC1P48547 511 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 BTN3A2P78410 334 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 IRF9Q00978 393 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 TGM3Q08188 693 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 Q0VFX4 171 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 CHIT1Q13231 466 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 MFAP5Q13361 173 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 DOC2AQ14183 400 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 ABRAXAS2Q15018 415 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 PCOLCEQ15113 449 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 INPP5JQ15735 1006 aaPredicted RBP10.57□□□□□ -0.72
RFFL-204ENST00000414419 NSDHLQ15738 373 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 BTBD16Q32M84 506 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 CRB2Q5IJ48 1285 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 LGSNQ5TDP6 509 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 SIRT6Q8N6T7 355 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 PLPP5Q8NEB5 264 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 UHMK1Q8TAS1 419 aaKnown RBP10.57□□□□□ -0.72
RFFL-204ENST00000414419 BRIX1Q8TDN6 353 aaKnown RBP10.57□□□□□ -0.72
RFFL-204ENST00000414419 CREB3L4Q8TEY5 395 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 PPP4R1Q8TF05 950 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 SLC44A1Q8WWI5 657 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 UBE2E3Q969T4 207 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 GAL3ST3Q96A11 431 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 MIB2Q96AX9 1013 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 ATOH8Q96SQ7 321 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 PAFAH2Q99487 392 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 WDR77Q9BQA1 342 aaPredicted RBP10.57□□□□□ -0.72
RFFL-204ENST00000414419 RHOXF2Q9BQY4 288 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 FUT8Q9BYC5 575 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 SLC29A3Q9BZD2 475 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 RHBGQ9H310 441 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 KLHL31Q9H511 634 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 ZBTB20Q9HC78 741 aaPredicted RBP10.57□□□□□ -0.72
RFFL-204ENST00000414419 TEKT2Q9UIF3 430 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 SHANK1Q9Y566 2161 aa10.57□□□□□ -0.72
RFFL-204ENST00000414419 CPAMD8Q8IZJ3 1885 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 IGHV3-20A0A0C4DH32 117 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 EXOC1LA0A1B0GW35 172 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 HMX2A2RU54 273 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 LRIT2A6NDA9 550 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 OR2W5A6NFC9 320 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 MAGEB17A8MXT2 336 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 ERI3O43414 337 aaKnown RBP10.56□□□□□ -0.72
RFFL-204ENST00000414419 PRMT3O60678 531 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 CLEC3AO75596 197 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 SEC24DO94855 1032 aaPredicted RBP10.56□□□□□ -0.72
RFFL-204ENST00000414419 ALDOAP04075 364 aaKnown RBP10.56□□□□□ -0.72
RFFL-204ENST00000414419 RNH1P13489 461 aaKnown RBP10.56□□□□□ -0.72
RFFL-204ENST00000414419 ECHS1P30084 290 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 CD97P48960 835 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 ARG2P78540 354 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 HYAL2Q12891 473 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 TLR1Q15399 786 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 TBCCQ15814 346 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 PFKFB4Q16877 469 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 TRIM40Q6P9F5 258 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 IGFL2Q6UWQ7 119 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 Q6ZS92 163 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 LANCL3Q6ZV70 420 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 ANKRD37Q7Z713 158 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 CENPLQ8N0S6 344 aaPredicted RBP10.56□□□□□ -0.72
RFFL-204ENST00000414419 Q8NA96 180 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 ARMC2Q8NEN0 867 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 WDR34Q96EX3 536 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 SCYL1Q96KG9 808 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 MAGEB10Q96LZ2 347 aaPredicted RBP10.56□□□□□ -0.72
RFFL-204ENST00000414419 PTCHD1Q96NR3 888 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 LPAR4Q99677 370 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 REXO4Q9GZR2 422 aaKnown RBP10.56□□□□□ -0.72
RFFL-204ENST00000414419 COPS7BQ9H9Q2 264 aaPredicted RBP10.56□□□□□ -0.72
RFFL-204ENST00000414419 CPSF2Q9P2I0 782 aaKnown RBP10.56□□□□□ -0.72
RFFL-204ENST00000414419 COPG2Q9UBF2 871 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 SVILO95425 2214 aa10.56□□□□□ -0.72
RFFL-204ENST00000414419 A0A0G2JN53 185 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 A8MUI8 341 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 B3GALT2O43825 422 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 RBP1P09455 135 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 SMIM10L1P0DMW3 83 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 MYBL2P10244 700 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 ITGAMP11215 1152 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 PCNAP12004 261 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 HNRNPH1P31943 449 aaKnown RBP10.55□□□□□ -0.72
RFFL-204ENST00000414419 EFNA3P52797 238 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 PLA2G16P53816 162 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 ALDH18A1P54886 795 aaKnown RBP10.55□□□□□ -0.72
RFFL-204ENST00000414419 OR4D2P58180 307 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 RHAGQ02094 409 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 RCN2Q14257 317 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 SETDB1Q15047 1291 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 EXT1Q16394 746 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 TSNAXIP1Q2TAA8 658 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 SFT2D3Q587I9 215 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 UBAP2Q5T6F2 1119 aaKnown RBP10.55□□□□□ -0.72
RFFL-204ENST00000414419 ABHD17BQ5VST6 288 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 PLAG1Q6DJT9 500 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 MED27Q6P2C8 311 aa10.55□□□□□ -0.72
RFFL-204ENST00000414419 PAPD4Q6PIY7 484 aaKnown RBP10.55□□□□□ -0.72
RFFL-204ENST00000414419 TRMT10CQ7L0Y3 403 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms