RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 PRSS42Q7Z5A4 293 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ABI3BPQ7Z7G0 1075 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 DPPA2Q7Z7J5 298 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PRUNE1Q86TP1 453 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 HORMAD1Q86X24 394 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CXorf67Q86X51 503 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PROSER1Q86XN7 944 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 KMT5CQ86Y97 462 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF280BQ86YH2 543 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 HPS6Q86YV9 775 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PRSS58Q8IYP2 241 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 KIRREL3Q8IZU9 778 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ABRAQ8N0Z2 381 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 KIF2BQ8N4N8 673 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ALLCQ8N6M5 410 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 UBL4BQ8N7F7 174 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ANKRD44Q8N8A2 993 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 KYQ8NBH2 561 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM116Q8NCL8 245 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PAPD5Q8NDF8 572 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ADPRHL1Q8NDY3 354 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CSNK2A3Q8NEV1 391 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 NUDT10Q8NFP7 164 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 DNERQ8NFT8 737 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 OR2V1Q8NHB1 315 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 VANGL1Q8TAA9 524 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 TBC1D16Q8TBP0 767 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 FNDC8Q8TC99 324 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PNPT1Q8TCS8 783 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 NRG4Q8WWG1 115 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 BORCS5Q969J3 196 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 RAB24Q969Q5 203 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 EME1Q96AY2 570 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 C3orf49Q96BT1 292 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 SNRNP40Q96DI7 357 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 MBD6Q96DN6 1003 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ELP4Q96EB1 424 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ARSGQ96EG1 525 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 SGTBQ96EQ0 304 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 RAX2Q96IS3 184 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 PACRGQ96M98 296 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 SLC46A1Q96NT5 459 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ZIM3Q96PE6 472 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF385AQ96PM9 386 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 GAD1Q99259 594 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 KRT12Q99456 494 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 EGFL8Q99944 293 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 VRK1Q99986 396 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 MAPKAP1Q9BPZ7 522 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM246Q9BRR3 403 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 NAT9Q9BTE0 207 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 TEKT3Q9BXF9 490 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 POLDIP3Q9BY77 421 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 GPR88Q9GZN0 384 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 EGLN1Q9GZT9 426 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ATG10Q9H0Y0 220 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 RANBP3Q9H6Z4 567 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 MARCH7Q9H992 704 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 VIPAS39Q9H9C1 493 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 COG4Q9H9E3 785 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 IMP3Q9NV31 184 aaKnown RBP3.48□□□□□ -1.85
SF3B1-203ENST00000414174 TAS2R1Q9NYW7 299 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 SLC17A7Q9P2U7 560 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ONECUT1Q9UBC0 465 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 RBPJLQ9UBG7 517 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 BCAP29Q9UHQ4 241 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CDH22Q9UJ99 828 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 MGAT4BQ9UQ53 548 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 POFUT2Q9Y2G5 429 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 GRIP1Q9Y3R0 1128 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 CPQQ9Y646 472 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 HS3ST3A1Q9Y663 406 aa3.48□□□□□ -1.85
SF3B1-203ENST00000414174 ERCC6Q03468 1493 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 WDR33Q9C0J8 1336 aaKnown RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF644Q9H582 1327 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 LOC102723996A0A087X1L8 192 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 A0A0A6YYK5 440 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 A0A1W2PPQ1 181 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 A0A1W2PQF6 199 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PQLC2LA1A4F0 135 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 CLEC18AA5D8T8 446 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PRR23AA6NEV1 266 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 TMEM191CA6NGB0 347 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ANKRD61A6NGH8 418 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PRAMEF25A6NGN4 478 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 SMIM23A6NLE4 172 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 OR2AT4A6NND4 320 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 MAGEB17A8MXT2 336 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 E9PAM4 449 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PRAMEF26H0Y7S4 382 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 KLRC4-KLRK1H3BQV0 150 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 hCG_2039718K7EN88 272 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 M0QZK8 103 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 PEX12O00623 359 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 TXNDC9O14530 226 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 CCSO14618 274 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ACOX3O15254 700 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 STX7O15400 261 aaKnown RBP3.47□□□□□ -1.85
SF3B1-203ENST00000414174 HSPA12AO43301 675 aa3.47□□□□□ -1.85
SF3B1-203ENST00000414174 ZNF208O43345 1280 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms