RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 FCGR1AP12314 374 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 GJA1P17302 382 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 DDX5P17844 614 aaKnown RBP9.04□□□□□ -0.96
SNHG3-201ENST00000413987 FASP25445 335 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 YWHAQP27348 245 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 MAGEA11P43364 429 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 GDI2P50395 445 aaKnown RBP9.04□□□□□ -0.96
SNHG3-201ENST00000413987 EFEMP1Q12805 493 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 PPM1JQ5JR12 505 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 TMTC4Q5T4D3 741 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 ZNF697Q5TEC3 545 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 LIPMQ5VYY2 423 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 CST9LP1Q5W188 147 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 BTBD8Q5XKL5 378 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 ZNF773Q6PK81 442 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 NAPRTQ6XQN6 538 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 AQP12AQ8IXF9 295 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 CBR4Q8N4T8 237 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 DHRSXQ8N5I4 330 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 LEMD2Q8NC56 503 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 SLC24A4Q8NFF2 622 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 OR13H1Q8NG92 308 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 OR14C36Q8NHC7 312 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 PHOSPHO2Q8TCD6 241 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 ARNTL2Q8WYA1 636 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 SLAMF9Q96A28 289 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 SLC45A3Q96JT2 553 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 TSNARE1Q96NA8 513 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 NMRAL1Q9HBL8 299 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 G6PC2Q9NQR9 355 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 MTMR10Q9NXD2 777 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 AP4E1Q9UPM8 1137 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 A0A0A0MRY4 1105 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 SLC33A1O00400 549 aaPredicted RBP9.04□□□□□ -0.96
SNHG3-201ENST00000413987 DNAJB5O75953 348 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 MYO1DO94832 1006 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 RASAL1O95294 804 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 LGI1O95970 557 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 SERPINF2P08697 491 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 HMGA1P17096 107 aaKnown RBP9.04□□□□□ -0.96
SNHG3-201ENST00000413987 GOT1P17174 413 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 EPORP19235 508 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 BSGP35613 385 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 FNTBP49356 437 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 KHKP50053 298 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 SCGB2A2Q13296 93 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 GAB4Q2WGN9 574 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 COLEC12Q5KU26 742 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 IER5LQ5T953 404 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 PTRHD1Q6GMV3 140 aaKnown RBP9.04□□□□□ -0.96
SNHG3-201ENST00000413987 FAM45BPQ6NSW5 357 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 CHST9Q7L1S5 443 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 ADGRD2Q7Z7M1 963 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 CPNE9Q8IYJ1 553 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 FAM45AQ8TCE6 357 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 C14orf79Q96F83 325 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 NAA50Q9GZZ1 169 aaKnown RBP9.04□□□□□ -0.96
SNHG3-201ENST00000413987 PCDHAC1Q9H158 963 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 MTIF3Q9H2K0 278 aaKnown RBP9.04□□□□□ -0.96
SNHG3-201ENST00000413987 TLR9Q9NR96 1032 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 STAP1Q9ULZ2 295 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 SCML2Q9UQR0 700 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 INSL5Q9Y5Q6 135 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 KCNE2Q9Y6J6 123 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 TRBC2A0A5B9 178 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 SH3D21A4FU49 640 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 C2orf78A6NCI8 922 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 DLGAP1O14490 977 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 CTDSP2O14595 271 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 RGS13O14921 159 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 SLC22A1O15245 554 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 DEAF1O75398 565 aaPredicted RBP9.03□□□□□ -0.96
SNHG3-201ENST00000413987 SRP72O76094 671 aaKnown RBP9.03□□□□□ -0.96
SNHG3-201ENST00000413987 PCDH8O95206 1070 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 PIGNO95427 931 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 UGT2B4P06133 528 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 GNAO1P09471 354 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 UMPSP11172 480 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 HOXB3P14651 431 aaPredicted RBP9.03□□□□□ -0.96
SNHG3-201ENST00000413987 TYRP14679 529 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 NPPBP16860 134 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 HPCAL1P37235 193 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 LEPRP48357 1165 aaKnown RBP9.03□□□□□ -0.96
SNHG3-201ENST00000413987 HK3P52790 923 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 LIMK2P53671 638 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 CD300CQ08708 224 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 NEDD8Q15843 81 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 ATP6AP1Q15904 470 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 SPANXN3Q5MJ09 141 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 LRRC8EQ6NSJ5 796 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 SPRED1Q7Z699 444 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 CLEC14AQ86T13 490 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 TP53INP2Q8IXH6 220 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 PCDH20Q8N6Y1 951 aaKnown RBP9.03□□□□□ -0.96
SNHG3-201ENST00000413987 KREMEN2Q8NCW0 462 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 ABHD11Q8NFV4 315 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 ENKURQ8TC29 256 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 CYGBQ8WWM9 190 aa9.03□□□□□ -0.96
SNHG3-201ENST00000413987 CENPNQ96H22 339 aaPredicted RBP9.03□□□□□ -0.96
SNHG3-201ENST00000413987 FAR2Q96K12 515 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms