RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 NPC1O15118 1278 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 HOXD12P35452 270 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 FEN1P39748 380 aaKnown RBP13.66□□□□□ -0.22
ATRIP-204ENST00000412052 RAB33AQ14088 237 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 TBCEQ15813 527 aaPredicted RBP13.66□□□□□ -0.22
ATRIP-204ENST00000412052 TPRG1LQ5T0D9 272 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 TMEM215Q68D42 235 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 HTR3DQ70Z44 454 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 SLC7A5P1Q8MH63 180 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 PARP16Q8N5Y8 322 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 KIAA1958Q8N8K9 716 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 B3GNT7Q8NFL0 401 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 CLP1Q92989 425 aaKnown RBP13.66□□□□□ -0.22
ATRIP-204ENST00000412052 ITPKCQ96DU7 683 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 SLC46A2Q9BY10 475 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 KLHL42Q9P2K6 505 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 SPASTQ9UBP0 616 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 OGDHLQ9ULD0 1010 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 PPIL1Q9Y3C6 166 aa13.66□□□□□ -0.22
ATRIP-204ENST00000412052 CKAP5Q14008 2032 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 PRMT3O60678 531 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 LEFTY1O75610 366 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 SLCO2B1O94956 709 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 URODP06132 367 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 ALOX12P18054 663 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 GABRB1P18505 474 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 POU1F1P28069 291 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 SERPINB1P30740 379 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 TIA1P31483 386 aaKnown RBP eCLIP13.65□□□□□ -0.22
ATRIP-204ENST00000412052 CCR2P41597 374 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 METAP1P53582 386 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 SCARB2Q14108 478 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 SLC5A12Q1EHB4 618 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 UAP1L1Q3KQV9 507 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 RPS26P11Q5JNZ5 115 aaPredicted RBP13.65□□□□□ -0.22
ATRIP-204ENST00000412052 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.65□□□□□ -0.22
ATRIP-204ENST00000412052 COMMD6Q7Z4G1 85 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 RAVER1Q8IY67 606 aaKnown RBP13.65□□□□□ -0.22
ATRIP-204ENST00000412052 STX19Q8N4C7 294 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 CHTF18Q8WVB6 975 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 MRPS31Q92665 395 aaKnown RBP13.65□□□□□ -0.22
ATRIP-204ENST00000412052 H0YIV9 168 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 PSIP1O75475 530 aaKnown RBP13.65□□□□□ -0.22
ATRIP-204ENST00000412052 TNFRSF21O75509 655 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 KLHL18O94889 574 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 ALOX5P09917 674 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 SOAT1P35610 550 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 NR4A2P43354 598 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 DESI1Q6ICB0 168 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 GDPD4Q6W3E5 623 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 CYP4Z2PQ8N1L4 340 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 FAM129BQ96TA1 746 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 KCNS3Q9BQ31 491 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 RSPO3Q9BXY4 272 aaPredicted RBP13.65□□□□□ -0.22
ATRIP-204ENST00000412052 C14orf119Q9NWQ9 140 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 ANKMY1Q9P2S6 941 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 GULP1Q9UBP9 304 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 BTNL2Q9UIR0 455 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 DUSP12Q9UNI6 340 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
ATRIP-204ENST00000412052 EIF3FO00303 357 aaPredicted RBP13.64□□□□□ -0.23
ATRIP-204ENST00000412052 POP4O95707 220 aaKnown RBP13.64□□□□□ -0.23
ATRIP-204ENST00000412052 RECKO95980 971 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 CTSLP07711 333 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 STARD3Q14849 445 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 MED22Q15528 200 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 ARSIQ5FYB1 569 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 BCDIN3DQ7Z5W3 292 aaKnown RBP13.64□□□□□ -0.23
ATRIP-204ENST00000412052 ZNF605Q86T29 641 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 TMC8Q8IU68 726 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 SLC44A2Q8IWA5 706 aaPredicted RBP13.64□□□□□ -0.23
ATRIP-204ENST00000412052 TCEAL8Q8IYN2 117 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 CELF2-AS1Q8N7Q2 184 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 TMEM159Q96B96 161 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 COQ8BQ96D53 544 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 LINC00597Q9H2U6 94 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 FKBP14Q9NWM8 211 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 RAB23Q9ULC3 237 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 GPC6Q9Y625 555 aaPredicted RBP13.64□□□□□ -0.23
ATRIP-204ENST00000412052 SERTM1A2A2V5 107 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 SLC16A5O15375 505 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 COQ9O75208 318 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 PABPC1P11940 636 aaKnown RBP13.64□□□□□ -0.23
ATRIP-204ENST00000412052 HOXB6P17509 224 aaKnown RBP13.64□□□□□ -0.23
ATRIP-204ENST00000412052 TGM4P49221 684 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 RGS6P49758 472 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 PTPN5P54829 565 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 TBPL1P62380 186 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 SLBPQ14493 270 aaKnown RBP eCLIP13.64□□□□□ -0.23
ATRIP-204ENST00000412052 IFI44LQ53G44 452 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 C10orf62Q5T681 223 aaPredicted RBP13.64□□□□□ -0.23
ATRIP-204ENST00000412052 ATAD3BQ5T9A4 648 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 TTC23LQ6PF05 361 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 RASGRP3Q8IV61 690 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 SLC39A11Q8N1S5 342 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 ZNF480Q8WV37 535 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 IL4I1Q96RQ9 567 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 CORO1BQ9BR76 489 aa13.64□□□□□ -0.23
ATRIP-204ENST00000412052 TSEN34Q9BSV6 310 aaKnown RBP13.64□□□□□ -0.23
ATRIP-204ENST00000412052 IMPAD1Q9NX62 359 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms