RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 SHANK1Q9Y566 2161 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 LOC390937A0A1W2PQ73 354 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 NKX6-3A6NJ46 265 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 MAGEB2O15479 319 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 SAP30O75446 220 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 PRH1P02810 166 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 KRT3P12035 628 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 KIR3DL2P43630 455 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 MT4P47944 62 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 RXRGP48443 463 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 LIG4P49917 911 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 ZNF131P52739 623 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 GALCP54803 685 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 ADARB1P78563 741 aaKnown RBP-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 MSLNQ13421 630 aaPredicted RBP-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 FAM98BQ52LJ0 330 aaKnown RBP-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 LINC00483Q53H64 154 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 OR4C11Q6IEV9 310 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 SASS6Q6UVJ0 657 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 CARNMT1Q8N4J0 409 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 Q8NDZ9 215 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 ETNPPLQ8TBG4 499 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 SLC22A8Q8TCC7 542 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 METTL21AQ8WXB1 218 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 CASP10Q92851 521 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 CDCA3Q99618 268 aaPredicted RBP-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 PAGR1Q9BTK6 254 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 ZMYND12Q9H0C1 365 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 SGK2Q9HBY8 427 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 Q9N2K0 584 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 OPN4Q9UHM6 478 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 ZNF221Q9UK13 617 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 CCPG1Q9ULG6 757 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 APCP25054 2843 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 STARD9Q9P2P6 4700 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 CREBBPQ92793 2442 aa-0.6□□□□□ -2.51
RNU4-61P-201ENST00000411243 FBLL1A6NHQ2 334 aaKnown RBP-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 KRT13P13646 458 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 LGALS3P17931 250 aaKnown RBP-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 ALDH3A2P51648 485 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 RARSP54136 660 aaKnown RBP-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 PPP1R3AQ16821 1122 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 QRICH1Q2TAL8 776 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 FGD3Q5JSP0 725 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 TSPO2Q5TGU0 170 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 IL31Q6EBC2 164 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 ARID3BQ8IVW6 561 aaPredicted RBP-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 DND1Q8IYX4 353 aaKnown RBP-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 OR2L8Q8NGY9 312 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 PHOSPHO2Q8TCD6 241 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 SMARCE1Q969G3 411 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 INTS12Q96CB8 462 aaKnown RBP-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 APOPT1Q96IL0 206 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 LINC00477Q96M19 166 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 ALKBH3Q96Q83 286 aaPredicted RBP-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 NXF3Q9H4D5 531 aaKnown RBP-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 POLR1BQ9H9Y6 1135 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 KCNK13Q9HB14 408 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 SETD4Q9NVD3 440 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 NENFQ9UMX5 172 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 CACNG2Q9Y698 323 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 CELSR1Q9NYQ6 3014 aa-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 TPRP12270 2363 aaKnown RBP-0.61□□□□□ -2.51
RNU4-61P-201ENST00000411243 CACNA1AO00555 2505 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 ABCA13Q86UQ4 5058 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 PDZD2O15018 2839 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 A8MU76 341 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 FBP2O00757 339 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 IFIT1P09914 478 aaKnown RBP-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 SMIM18P0DKX4 95 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 FUSP35637 526 aaKnown RBP eCLIP-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 SPANXN4Q5MJ08 99 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 FIGLAQ6QHK4 219 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 DET1Q7L5Y6 550 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 ZNRF1Q8ND25 227 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 ANKRD27Q96NW4 1050 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 OR5M11Q96RB7 305 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 NRTNQ99748 197 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 SMC4Q9NTJ3 1288 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 NIP7Q9Y221 180 aaKnown RBP eCLIP-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 AMMECR1Q9Y4X0 333 aaPredicted RBP-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 COL5A3P25940 1745 aaPredicted RBP-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 MALRD1Q5VYJ5 2156 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 TENM2Q9NT68 2774 aa-0.62□□□□□ -2.51
RNU4-61P-201ENST00000411243 CACNA1EQ15878 2313 aa-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 NPHP3Q7Z494 1330 aa-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 SONP18583 2426 aaKnown RBP-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 ZANQ9Y493 2812 aa-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 IGLV8-61A0A075B6I0 122 aa-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 SEC14L2O76054 403 aa-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 IGHV3-23P01764 117 aa-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 RNH1P13489 461 aaKnown RBP-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 PRLRP16471 622 aa-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 LONP1P36776 959 aaKnown RBP-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 VAMP7P51809 220 aa-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 NEK3P51956 506 aa-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 IGBP1P78318 339 aa-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 UBE3AQ05086 875 aa-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 PICALMQ13492 652 aa-0.63□□□□□ -2.51
RNU4-61P-201ENST00000411243 ASAH1Q13510 395 aa-0.63□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms