RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 KCNJ16Q9NPI9 418 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 MMP26Q9NRE1 261 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 SNTG1Q9NSN8 517 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 BABAM1Q9NWV8 329 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 SIGLEC8Q9NYZ4 499 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 ABI3Q9P2A4 366 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 THAP10Q9P2Z0 257 aaPredicted RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF639Q9UID6 485 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC45A1Q9Y2W3 748 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 HEMK1Q9Y5R4 338 aaPredicted RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 MRPL42Q9Y6G3 142 aaKnown RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 NUP214P35658 2090 aaPredicted RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 FANCMQ8IYD8 2048 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 TRIP11Q15643 1979 aa-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 RANBP2P49792 3224 aaKnown RBP-1.8□□□□□ -2.7
RNU4-88P-201ENST00000411220 PXDNLA1KZ92 1463 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 WASHC2CQ9Y4E1 1318 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGLV4-3A0A075B6K6 122 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 IGLV5-45A0A087WSX0 123 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 A0A0G2JMM0 328 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZCWPW2A0A1B0GU75 182 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 A0A1W2PPB8 328 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 A0A1W2PRS3 328 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 SYNDIG1LA6NDD5 238 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ERICH4A6NGS2 130 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 CAPN8A6NHC0 703 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 KIR3DP1A8MWS1 328 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 PES1O00541 588 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 IMPA2O14732 288 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TFECO14948 347 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZBTB5O15062 677 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC22A2O15244 555 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 MID1O15344 667 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF749O43361 778 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 FRS3O43559 492 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 GAS7O60861 476 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ENTPD3O75355 529 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TIPRLO75663 272 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TSPAN9O75954 239 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 KAT7O95251 611 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 CPSF4O95639 269 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 CHEK2O96017 543 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 OPN1LWP04000 364 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 APPP05067 770 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 FCER2P06734 321 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 CHRM4P08173 479 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 SNRPCP09234 159 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 QDPRP09417 244 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 UROSP10746 265 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 UGT1A6P19224 532 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TCN2P20062 427 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 DDCP20711 480 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 VIPR2P41587 438 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 MMP14P50281 582 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 CLCNKBP51801 687 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 PRELPP51888 382 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 EFNA4P52798 201 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 LIMK1P53667 647 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 FAM3BP58499 235 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 RBX1P62877 108 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 KCNJ2P63252 427 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TSPY1Q01534 308 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 LGALS3BPQ08380 585 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TBL3Q12788 808 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TCP10Q12799 353 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 DAZ2Q13117 558 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 HTR4Q13639 388 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 PDE1CQ14123 709 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 MLC1Q15049 377 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 CDK5R1Q15078 307 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 PCBP2Q15366 365 aaKnown RBP eCLIP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 UBE2SQ16763 222 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 DEFB135Q30KP9 77 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 DPCR1Q3MIW9 517 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 TRIM60Q495X7 471 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 C6orf99Q4VX62 202 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZCWPW2Q504Y3 356 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 SOWAHCQ53LP3 525 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 PAN3Q58A45 887 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 SNX30Q5VWJ9 437 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 FRG2Q64ET8 278 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 LEMD1Q68G75 181 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ACSM5Q6NUN0 579 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 SLC39A4Q6P5W5 647 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 PSRC1Q6PGN9 363 aaPredicted RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 CYP26C1Q6V0L0 522 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 KIF6Q6ZMV9 814 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 NOL8Q76FK4 1167 aaKnown RBP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ARMCX2Q7L311 632 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 H2BFWTQ7Z2G1 175 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 FGD2Q7Z6J4 655 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 AMZ2Q86W34 360 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 DGKHQ86XP1 1220 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 RAB11FIP4Q86YS3 637 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 MISPQ8IVT2 679 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ZNF100Q8IYN0 542 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 PRSS58Q8IYP2 241 aa-1.81□□□□□ -2.7
RNU4-88P-201ENST00000411220 ADGRF2Q8IZF7 708 aa-1.81□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms