RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 GOT1L1Q8NHS2 421 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CKAP2Q8WWK9 683 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 METTL21AQ8WXB1 218 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DNASE2BQ8WZ79 361 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RAD54LQ92698 747 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC47A1Q96FL8 570 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RAD9AQ99638 391 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OLFM1Q99784 485 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NAPBQ9H115 298 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C2orf40Q9H1Z8 148 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ARRDC1-AS1Q9H2J1 176 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CPVLQ9H3G5 476 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TUFT1Q9NNX1 390 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR6C2Q9NZP2 312 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MTRRQ9UBK8 725 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TBX21Q9UL17 535 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 STUB1Q9UNE7 303 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 Q9Y3F1 56 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SELENOKQ9Y6D0 94 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FRYLO94915 3013 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRIOO75962 3097 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TAF1P21675 1872 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZFHX2Q9C0A1 2572 aaPredicted RBP2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 EPG5Q9HCE0 2579 aa2.39□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PSME4Q14997 1843 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LOC101059948A0A1B0GTJ6 334 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ILVBLA1L0T0 632 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LRRD1A4D1F6 860 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ASB14A6NK59 587 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SDR42E2A6NKP2 422 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IFITM10A6NMD0 228 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SRRM3A6NNA2 597 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ENO4A6NNW6 628 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TULP2O00295 520 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 P2RY10O00398 339 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ATP6V0E1O15342 81 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR10H2O60403 315 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DFFBO76075 338 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GCNT3O95395 438 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MOCS2O96007 188 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IGKV3-20P01619 116 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 APOHP02749 345 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 UQCRFS1P1P0C7P4 283 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RNF224P0DH78 156 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ATP6V1B1P15313 513 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CD22P20273 847 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TNFRSF8P28908 595 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 WNT5AP41221 380 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GYG1P46976 350 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GLIPR1P48060 266 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 VAMP7P51809 220 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 THOP1P52888 689 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ACLYP53396 1101 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ERVFC1-1P60608 527 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MAT1AQ00266 395 aaKnown RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RUNX1T1Q06455 604 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LGALS3BPQ08380 585 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PNRC1Q12796 327 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CETN1Q12798 172 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TCP10Q12799 353 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRAP1Q12931 704 aaKnown RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TUBB2AQ13885 445 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 VEZF1Q14119 521 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PPA1Q15181 289 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TEAD2Q15562 447 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RABL6Q3YEC7 729 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KLHL26Q53HC5 615 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 HERC4Q5GLZ8 1057 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NHSL2Q5HYW2 709 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GLRA4Q5JXX5 417 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C9orf50Q5SZB4 431 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LRRC38Q5VT99 294 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ARMC3Q5W041 872 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TXNRD3NBQ6F5E7 133 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CTR9Q6PD62 1173 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRAT1Q6PIZ9 186 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C19orf48Q6RUI8 117 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PRSS57Q6UWY2 283 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LINC00696Q6ZRV3 163 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FAM47EQ6ZV65 393 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC26A9Q7LBE3 791 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ATG9AQ7Z3C6 839 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SATL1Q86VE3 508 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CRYBG2Q8N1P7 616 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 STPG4Q8N801 248 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC24A4Q8NFF2 622 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NCOA7Q8NI08 942 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 VANGL1Q8TAA9 524 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CHURC1Q8WUH1 139 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NSMAFQ92636 917 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PYCR2Q96C36 320 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GIMAP5Q96F15 307 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FAM71F1Q96KD3 344 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LMLNQ96KR4 655 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LINC00615Q96LM1 132 aaPredicted RBP2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DUX3Q96PT4 197 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PCYT2Q99447 389 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TUBB2BQ9BVA1 445 aa2.38□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CSTL1Q9H114 145 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms