RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 PCDHA7Q9UN72 937 aa4.54□□□□□ -1.68
LSM5-205ENST00000409952 FOXJ3Q9UPW0 622 aa4.54□□□□□ -1.68
LSM5-205ENST00000409952 MRPS33Q9Y291 106 aaKnown RBP4.54□□□□□ -1.68
LSM5-205ENST00000409952 CHTOPQ9Y3Y2 248 aaKnown RBP4.54□□□□□ -1.68
LSM5-205ENST00000409952 PCDHAC2Q9Y5I4 1007 aa4.54□□□□□ -1.68
LSM5-205ENST00000409952 GOLGA6L7A0A1B0GV03 622 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 A0A1W2PPC1 479 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 MBLAC1A4D2B0 266 aaPredicted RBP4.53□□□□□ -1.68
LSM5-205ENST00000409952 GOLGA8OA6NCC3 632 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 ANTXRLA6NF34 631 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 ANKRD61A6NGH8 418 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 E5RGE8 158 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 GOLGA8NF8WBI6 632 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 OGTO15294 1046 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 CTAGE5O15320 804 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 PAPSS2O95340 614 aaPredicted RBP4.53□□□□□ -1.68
LSM5-205ENST00000409952 SERPINA3P01011 423 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 FGF4P08620 206 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 OR3A3P47888 321 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 PTH2RP49190 550 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 ACADVLP49748 655 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 CLCN4P51793 760 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 GEMP55040 296 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 CBX1P83916 185 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 ZXDBP98169 803 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 GHRHRQ02643 423 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 KEAP1Q14145 624 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 ODF4Q2M2E3 257 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 SPDYCQ5MJ68 293 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 C1orf185Q5T7R7 199 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 C20orf194Q5TEA3 1177 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 TYW3Q6IPR3 259 aaKnown RBP4.53□□□□□ -1.68
LSM5-205ENST00000409952 MIS18BP1Q6P0N0 1132 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 ZNF704Q6ZNC4 412 aaPredicted RBP4.53□□□□□ -1.68
LSM5-205ENST00000409952 Q6ZSV7 163 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 EFL1Q7Z2Z2 1120 aaKnown RBP4.53□□□□□ -1.68
LSM5-205ENST00000409952 NANOGNBQ7Z5D8 188 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 PRUNE1Q86TP1 453 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 YRDCQ86U90 279 aaKnown RBP4.53□□□□□ -1.68
LSM5-205ENST00000409952 PTOV1Q86YD1 416 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 ZDHHC17Q8IUH5 632 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 ZNF34Q8IZ26 560 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 PRSS35Q8N3Z0 413 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 TMEM99Q8N816 258 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 TRPV3Q8NET8 790 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 ZNF397Q8NF99 534 aaPredicted RBP4.53□□□□□ -1.68
LSM5-205ENST00000409952 GPRC5AQ8NFJ5 357 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 OR11H4Q8NGC9 324 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 PHYHIPQ92561 330 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 SEPT8Q92599 483 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 PINX1Q96BK5 328 aaKnown RBP4.53□□□□□ -1.68
LSM5-205ENST00000409952 MARK4Q96L34 752 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 SGK494Q96LW2 274 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 MAP3K3Q99759 626 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 GON7Q9BXV9 100 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 PKIBQ9C010 78 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 C5orf66Q9H5L9 145 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 METTL7AQ9H8H3 244 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 DDX28Q9NUL7 540 aaKnown RBP4.53□□□□□ -1.68
LSM5-205ENST00000409952 ZNF701Q9NV72 531 aaPredicted RBP4.53□□□□□ -1.68
LSM5-205ENST00000409952 ASB6Q9NWX5 421 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 BARHL2Q9NY43 387 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 IL36RNQ9UBH0 155 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 DAPK2Q9UIK4 370 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 DLGAP4Q9Y2H0 992 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 NSG2Q9Y328 171 aa4.53□□□□□ -1.68
LSM5-205ENST00000409952 NPC1L1Q9UHC9 1359 aa4.53□□□□□ -1.69
LSM5-205ENST00000409952 IL16Q14005 1332 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 WDR17Q8IZU2 1322 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 IGHV4-28A0A0C4DH34 117 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 TEX13DA0A0J9YY54 714 aaPredicted RBP4.52□□□□□ -1.69
LSM5-205ENST00000409952 hDV102S1A0JD36 115 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 I6L893 689 aaPredicted RBP4.52□□□□□ -1.69
LSM5-205ENST00000409952 CASC3O15234 703 aaKnown RBP4.52□□□□□ -1.69
LSM5-205ENST00000409952 SYT7O43581 403 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 KIF5CO60282 957 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 SDC3O75056 442 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 SNNO75324 88 aaPredicted RBP4.52□□□□□ -1.69
LSM5-205ENST00000409952 CPNE6O95741 557 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 IGLV2-14P01704 120 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 APRTP07741 180 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 UQCRFS1P1P0C7P4 283 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 CT45A8P0DMV1 189 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 CT45A9P0DMV2 189 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 CCDC130P13994 396 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 ANPEPP15144 967 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 ITGB6P18564 788 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 CBLP22681 906 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 CA8P35219 290 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 SFTPDP35247 375 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 DLSTP36957 453 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 PTGFRP43088 359 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 RGS4P49798 205 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 PGGT1BP53609 377 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 MAZP56270 477 aaKnown RBP4.52□□□□□ -1.69
LSM5-205ENST00000409952 NLRP11P59045 1033 aaKnown RBP4.52□□□□□ -1.69
LSM5-205ENST00000409952 DMPKQ09013 629 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 NME3Q13232 169 aa4.52□□□□□ -1.69
LSM5-205ENST00000409952 EFTUD2Q15029 972 aaKnown RBP eCLIP4.52□□□□□ -1.692e-6■■■■■ 33.5
LSM5-205ENST00000409952 GPAT3Q53EU6 434 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms