RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 LRTOMTQ8WZ04 291 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 FNDC11Q9BVV2 318 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 KLHL4Q9C0H6 718 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 EXD2Q9NVH0 621 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 FAM234BA2RU67 622 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 GFRA2O00451 464 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 AREL1O15033 823 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 ZNF888P0CJ79 500 aaPredicted RBP10.92□□□□□ -0.66
SNX13-202ENST00000409604 FUT4P22083 530 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 EIF2DP41214 584 aaKnown RBP10.92□□□□□ -0.66
SNX13-202ENST00000409604 PTDSS1P48651 473 aaKnown RBP10.92□□□□□ -0.66
SNX13-202ENST00000409604 CDH12P55289 794 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 TAS2R41P59536 307 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 PRR5P85299 388 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 ZNF763Q0D2J5 394 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 ALG11Q2TAA5 492 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 CAPRIN2Q6IMN6 1127 aaKnown RBP10.92□□□□□ -0.66
SNX13-202ENST00000409604 CDK20Q8IZL9 346 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 GRHL3Q8TE85 626 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 CANT1Q8WVQ1 401 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 UBXN10Q96LJ8 280 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 DGAT2Q96PD7 388 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 GFM1Q96RP9 751 aaKnown RBP10.92□□□□□ -0.66
SNX13-202ENST00000409604 ANKRA2Q9H9E1 313 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 WASHC1A8K0Z3 465 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 FZD6O60353 706 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 NOBOXO60393 691 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 NR2F6P10588 404 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 OTX2P32243 289 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 SUOXP51687 545 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 B4GALNT1Q00973 533 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 DGCR6Q14129 220 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 NSDHLQ15738 373 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 GCNT6Q5T4J0 391 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 TCEAL6Q6IPX3 200 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 WASH2PQ6VEQ5 465 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 PACS2Q86VP3 889 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 TCEAL3Q969E4 200 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 CCT7Q99832 543 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 ZBTB20Q9HC78 741 aaPredicted RBP10.92□□□□□ -0.66
SNX13-202ENST00000409604 SCN3AQ9NY46 2000 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 CACNA1BQ00975 2339 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 C9J4A7 227 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 UBFD1O14562 309 aaKnown RBP10.92□□□□□ -0.66
SNX13-202ENST00000409604 ADAM23O75077 832 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 SERPINB7O75635 380 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 ZBTB11O95625 1053 aaPredicted RBP10.92□□□□□ -0.66
SNX13-202ENST00000409604 FHP07954 510 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 TNFRSF1BP20333 461 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 BCKDHBP21953 392 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 CDC73Q6P1J9 531 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 SMARCD3Q6STE5 483 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 IQCHQ86VS3 1027 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 CNTN4Q8IWV2 1026 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 SLAMF8Q9P0V8 285 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 IFT80Q9P2H3 777 aaPredicted RBP10.92□□□□□ -0.66
SNX13-202ENST00000409604 GMPR2Q9P2T1 348 aaKnown RBP10.92□□□□□ -0.66
SNX13-202ENST00000409604 ZFR2Q9UPR6 939 aaKnown RBP10.92□□□□□ -0.66
SNX13-202ENST00000409604 ICE1Q9Y2F5 2266 aa10.92□□□□□ -0.66
SNX13-202ENST00000409604 OR5K4A6NMS3 321 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 PPM1DO15297 605 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 FKBP6O75344 327 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 PRKD3O94806 890 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 UBXN7O94888 489 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 OR6A2O95222 327 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 HLA-DQA2P01906 255 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 SYPP08247 313 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 CHRM5P08912 532 aaPredicted RBP10.91□□□□□ -0.66
SNX13-202ENST00000409604 SAGP10523 405 aaPredicted RBP10.91□□□□□ -0.66
SNX13-202ENST00000409604 RPS3P23396 243 aaKnown RBP eCLIP10.91□□□□□ -0.66
SNX13-202ENST00000409604 DNAJB13P59910 316 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 SPIN4Q56A73 249 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 ZC3H12BQ5HYM0 836 aaKnown RBP10.91□□□□□ -0.66
SNX13-202ENST00000409604 PRAMEF17Q5VTA0 474 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 PRR22Q8IZ63 422 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 NLGN4XQ8N0W4 816 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 PGAM4Q8N0Y7 254 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 NFKBIDQ8NI38 313 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 SLC47A1Q96FL8 570 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 RMND5BQ96G75 393 aaPredicted RBP10.91□□□□□ -0.66
SNX13-202ENST00000409604 MCCC1Q96RQ3 725 aaPredicted RBP10.91□□□□□ -0.66
SNX13-202ENST00000409604 LIN28AQ9H9Z2 209 aaKnown RBP10.91□□□□□ -0.66
SNX13-202ENST00000409604 FBRSQ9HAH7 460 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 RNPEPL1Q9HAU8 725 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 COPS7AQ9UBW8 275 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 CKAP5Q14008 2032 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 YY2O15391 372 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 ANPEPP15144 967 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 PRKACGP22612 351 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 GSK3BP49841 420 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 NDUFAF5Q5TEU4 345 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 PATL1Q86TB9 770 aaKnown RBP10.91□□□□□ -0.66
SNX13-202ENST00000409604 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.91□□□□□ -0.66
SNX13-202ENST00000409604 CRIPAKQ8N1N5 446 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 SPEM1Q8N4L4 309 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 TMEM156Q8N614 296 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 BPIFB6Q8NFQ5 453 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 ARSGQ96EG1 525 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 PHOX2BQ99453 314 aa10.91□□□□□ -0.66
SNX13-202ENST00000409604 INPP5KQ9BT40 448 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms