RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 WDR70Q9NW82 654 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 G3BP2Q9UN86 482 aaKnown RBP13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 NAALAD2Q9Y3Q0 740 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 CCL27Q9Y4X3 112 aa13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 TMEM184BQ9Y519 407 aaPredicted RBP13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 POLR3HQ9Y535 204 aaPredicted RBP13.4□□□□□ -0.26
CHRNA1-204ENST00000409323 SDHDO14521 159 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 ZNF195O14628 629 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 HDAC3O15379 428 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 FOXS1O43638 330 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 RDH16O75452 317 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 EEDO75530 441 aaKnown RBP13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 MSL3P1P0C860 447 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 PTX3P26022 381 aaPredicted RBP13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 AQP5P55064 265 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 STXBP1P61764 594 aaKnown RBP13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 CSTF3Q12996 717 aaKnown RBP13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 EIF3IQ13347 325 aaKnown RBP13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 LCN10Q6JVE6 187 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 TLDC1Q6P9B6 456 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 TRIM40Q6P9F5 258 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 CEACAM20Q6UY09 585 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 CHSY3Q70JA7 882 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 TRIM46Q7Z4K8 759 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 GALNT6Q8NCL4 622 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 OR2L5Q8NG80 312 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 MMABQ96EY8 250 aaPredicted RBP13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 CHMP6Q96FZ7 201 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 MARK4Q96L34 752 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 SERPINI1Q99574 410 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 C1orf50Q9BV19 199 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 RBCK1Q9BYM8 510 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 POLR1BQ9H9Y6 1135 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 TXLNGQ9NUQ3 528 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 HCN3Q9P1Z3 774 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 VPS29Q9UBQ0 182 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 ADGRE2Q9UHX3 823 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 TSC22D4Q9Y3Q8 395 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 AK5Q9Y6K8 562 aa13.39□□□□□ -0.27
CHRNA1-204ENST00000409323 A0A0G2JND7 137 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 FITM1A5D6W6 292 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 SLC28A1O00337 649 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 LSM1O15116 133 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 SEC22BO75396 215 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 KLHL18O94889 574 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 KLK1P06870 262 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 ALOX12P18054 663 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 ITGAXP20702 1163 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 SSR2P43308 183 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 RPL38P63173 70 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 TBL3Q12788 808 aaKnown RBP13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 CAMK2BQ13554 666 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 MUM1Q2TAK8 710 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 ADPRMQ3LIE5 342 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 XKR7Q5GH72 579 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 NXNQ6DKJ4 435 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 ABHD17CQ6PCB6 329 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 FAM199XQ6PEV8 388 aaPredicted RBP13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 TMEM151BQ8IW70 566 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 GAL3ST3Q96A11 431 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 OR52B2Q96RD2 323 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 CCT8L2Q96SF2 557 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 YIPF2Q9BWQ6 316 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 ZNF717Q9BY31 904 aaPredicted RBP13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 AKTIPQ9H8T0 292 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 BRF2Q9HAW0 419 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 PRDM7Q9NQW5 492 aa13.38□□□□□ -0.27
CHRNA1-204ENST00000409323 TRABD2BA6NFA1 517 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 TXNDC9O14530 226 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 RGS14O43566 566 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 PRKRAO75569 313 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 STK17BO94768 372 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 SNUPNO95149 360 aaKnown RBP13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 GSTM2P28161 218 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 SERPINB1P30740 379 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 SLC5A2P31639 672 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 GCGRP47871 477 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 HK2P52789 917 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 RAB15P59190 212 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 NDUFA9Q16795 377 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 AP5B1Q2VPB7 878 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 RFTN2Q52LD8 501 aaPredicted RBP13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 OR4C11Q6IEV9 310 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 ABHD13Q7L211 337 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 COMMD6Q7Z4G1 85 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 ZFAND4Q86XD8 727 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 GBP7Q8N8V2 638 aaPredicted RBP13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 CDC26Q8NHZ8 85 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 RGMAQ96B86 450 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 FAR2Q96K12 515 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 SLC46A1Q96NT5 459 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 COPS7BQ9H9Q2 264 aaPredicted RBP13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 MEAF6Q9HAF1 191 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 LRTM1Q9HBL6 345 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 ANKHQ9HCJ1 492 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 A0A1B0GX78 115 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 URADA6NGE7 173 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 TMPRSS11DO60235 418 aa13.37□□□□□ -0.27
CHRNA1-204ENST00000409323 BRINP1O60477 761 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms