RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 TGFBR2P37173 567 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 RGS6P49758 472 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 HNRNPA0Q13151 305 aaKnown RBP12.49□□□□□ -0.41
PTPRN-202ENST00000409251 B3GLCTQ6Y288 498 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 ZNF683Q8IZ20 524 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 CLECL1Q8IZS7 167 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 CHAC2Q8WUX2 184 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 C1orf74Q96LT6 269 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 C1QTNF6Q9BXI9 259 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 DUSP21Q9H596 190 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 SPASTQ9UBP0 616 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 DLGAP4Q9Y2H0 992 aa12.49□□□□□ -0.41
PTPRN-202ENST00000409251 MRPS7Q9Y2R9 242 aaKnown RBP12.49□□□□□ -0.41
PTPRN-202ENST00000409251 ANTXRLA6NF34 631 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 LOC730098B7Z3J9 87 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 RPP40O75818 363 aaKnown RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 PDE9AO76083 593 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 ADORA3P0DMS8 318 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 PTNP21246 168 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 ITPKAP23677 461 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 CCR2P41597 374 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 TUBA1BP68363 451 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 RPL6Q02878 288 aaKnown RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 IL18Q14116 193 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 ZSWIM7Q19AV6 140 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 SUSD1Q6UWL2 747 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 TUBA1AQ71U36 451 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 KRT74Q7RTS7 529 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 CCDC71Q8IV32 467 aaPredicted RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 FAM109AQ8N4B1 249 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 GALNT6Q8NCL4 622 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 GGHQ92820 318 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 RIT1Q92963 219 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 MED30Q96HR3 178 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 TFB2MQ9H5Q4 396 aaKnown RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 IGFLR1Q9H665 355 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 ZNF639Q9UID6 485 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 TMPRSS11EQ9UL52 423 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 MKLN1Q9UL63 735 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 SNX7Q9UNH6 387 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 POLHQ9Y253 713 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 TRAV6A0A075B6T7 132 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 LOC102723532A0A0G2JNH3 316 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 LDB2O43679 373 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 PRAMEF11O60813 436 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 SERPINI2O75830 405 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 PKMP14618 531 aaKnown RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 STC1P52823 247 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 C10orf62Q5T681 223 aaPredicted RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 ANKRD33Q7Z3H0 272 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 SLC5A8Q8N695 610 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 KREMEN2Q8NCW0 462 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 PIH1D2Q8WWB5 315 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 ART5Q96L15 291 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 SNX18Q96RF0 628 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 BCL7BQ9BQE9 202 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 C11orf54Q9H0W9 315 aaPredicted RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 NKIRAS2Q9NYR9 191 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 H3BQ06 376 aaPredicted RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 WBP4O75554 376 aaKnown RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 CYP2A6P11509 494 aaPredicted RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 DNAJA1P31689 397 aaKnown RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 CD70P32970 193 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 ADRA1AP35348 466 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 NRIP1P48552 1158 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 GALNT1Q10472 559 aaPredicted RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 CDC20Q12834 499 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 SETMARQ53H47 684 aaPredicted RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 C22orf42Q6IC83 251 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 CCDC149Q6ZUS6 474 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 TMEM150AQ86TG1 271 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 MDGA1Q8NFP4 955 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 MTERF1Q99551 399 aaKnown RBP12.48□□□□□ -0.41
PTPRN-202ENST00000409251 CIPCQ9C0C6 399 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 ATG10Q9H0Y0 220 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 TBC1D24Q9ULP9 559 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 MYO16Q9Y6X6 1858 aa12.48□□□□□ -0.41
PTPRN-202ENST00000409251 TRIM64BA6NI03 449 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 MTX2O75431 263 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 COX7A2P14406 83 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 ACPPP15309 386 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 SOAT1P35610 550 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 RPS19P39019 145 aaKnown RBP12.47□□□□□ -0.41
PTPRN-202ENST00000409251 AKR1D1P51857 326 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 ARF5P84085 180 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 IL10RBQ08334 325 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 TATDN3Q17R31 274 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 ARTNQ5T4W7 220 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 MEX3DQ86XN8 651 aaKnown RBP12.47□□□□□ -0.41
PTPRN-202ENST00000409251 CCDC117Q8IWD4 279 aaPredicted RBP12.47□□□□□ -0.41
PTPRN-202ENST00000409251 POLR2J2Q9GZM3 115 aaKnown RBP12.47□□□□□ -0.41
PTPRN-202ENST00000409251 CRNNQ9UBG3 495 aaPredicted RBP12.47□□□□□ -0.41
PTPRN-202ENST00000409251 CACNA1CQ13936 2221 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 CLIC1O00299 241 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 FPGTO14772 594 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 PRKACAP17612 351 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 DNAJB1P25685 340 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 RYKP34925 604 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 FGFBP1Q14512 234 aa12.47□□□□□ -0.41
PTPRN-202ENST00000409251 WSCD2Q2TBF2 565 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms