RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 MAP3K5Q99683 1374 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 TULP2O00295 520 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 HMMRO75330 724 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 STAM2O75886 525 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 LETM1O95202 739 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 BAG3O95817 575 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 RAF1P04049 648 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 YES1P07947 543 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 IGHV4-38-2P0DP08 117 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 LIFP15018 202 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 ZNF18P17022 549 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 ELAVL4P26378 380 aaKnown RBP4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 MAGEB1P43366 347 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 OR3A1P47881 315 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 PDLIM4P50479 330 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 ZNF132P52740 706 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 CASP9P55211 416 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 UCP2P55851 309 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 RPP38P78345 283 aaKnown RBP4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 ZXDBP98169 803 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 POU3F1Q03052 451 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 ABRQ12979 859 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 IZUMO4Q1ZYL8 232 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 FGD3Q5JSP0 725 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 DCAF10Q5QP82 559 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 LCN1P1Q5VSP4 162 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 PM20D1Q6GTS8 502 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 KLHL10Q6JEL2 608 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 FOXL2NBQ6ZUU3 175 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 IL17RELQ6ZVW7 336 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 RCOR2Q8IZ40 523 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 TEX9Q8N6V9 391 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 TMEM99Q8N816 258 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 MAPKAPK5-AS1Q8N8E1 139 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 LRRC8CQ8TDW0 803 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 RSPH1Q8WYR4 309 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 ULK4Q96C45 1275 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 ZNF559Q9BR84 538 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 TMEM245Q9H330 911 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 KCNJ14Q9UNX9 436 aa4.33□□□□□ -1.72
HMGB3P18-201ENST00000406327 MSH6P52701 1360 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 CEMIPQ8WUJ3 1361 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 PRAC2D3DTV9 90 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 EPHB6O15197 1021 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 NME6O75414 186 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 CLN5O75503 358 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 DFFBO76075 338 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 ATP1A1P05023 1023 aaKnown RBP4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 ALPLP05186 524 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 ALPPP05187 535 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 HOXB7P09629 217 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 ALPPL2P10696 532 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 PCP11498 1178 aaKnown RBP4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 DESP17661 470 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 ARF4P18085 180 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 CLDN17P56750 224 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 EVCP57679 992 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 YBEYP58557 167 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 GPR17Q13304 367 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 KEAP1Q14145 624 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 ZNF770Q6IQ21 691 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 CD164L2Q6UWJ8 174 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 B3GLCTQ6Y288 498 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 MACC1Q6ZN28 852 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 MARK2Q7KZI7 788 aaKnown RBP4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 ADCK1Q86TW2 530 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 SERPINA12Q8IW75 414 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 OR13A1Q8NGR1 328 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 URGCPQ8TCY9 931 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 TAF4BQ92750 862 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 C4orf45Q96LM5 186 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 CDCA3Q99618 268 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 TRMT61BQ9BVS5 477 aaKnown RBP4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 OR2B2Q9GZK3 357 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 P2RY12Q9H244 342 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 PELI2Q9HAT8 420 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 UBQLN2Q9UHD9 624 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 CCPG1Q9ULG6 757 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 PIN4Q9Y237 131 aaKnown RBP4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 ZNF510Q9Y2H8 683 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 RPH3AQ9Y2J0 694 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 PCDHGB1Q9Y5G3 927 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 RGPD1P0DJD0 1748 aa4.32□□□□□ -1.72
HMGB3P18-201ENST00000406327 NWD1Q149M9 1564 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 MAP2P11137 1827 aaKnown RBP4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 TMEM129A0AVI4 362 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 MAGEB16A2A368 324 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 C5orf51A6NDU8 294 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 ARHGAP42A6NI28 874 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 M0R296 226 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 ACOT8O14734 319 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 INSIG1O15503 277 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 SMAD6O43541 496 aaKnown RBP4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 GLRA3O75311 464 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 FRAT2O75474 233 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 PPP1R3DO95685 299 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 EDN1P05305 212 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 LHCGRP22888 699 aa4.31□□□□□ -1.72
HMGB3P18-201ENST00000406327 AHCYP23526 432 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms