RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 TYRP14679 529 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 CD36P16671 472 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 CD40LGP29965 261 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 TBPL1P62380 186 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 IL1RL1Q01638 556 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 NOGQ13253 232 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 TBCEQ15813 527 aaPredicted RBP9.44□□□□□ -0.9
MSH2-202ENST00000406134 ZNF77Q15935 545 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 PERM1Q5SV97 790 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 CPTPQ5TA50 214 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 BRAT1Q6PJG6 821 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 COMMD6Q7Z4G1 85 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 MRPS31Q92665 395 aaKnown RBP9.44□□□□□ -0.9
MSH2-202ENST00000406134 WDR12Q9GZL7 423 aaKnown RBP9.44□□□□□ -0.9
MSH2-202ENST00000406134 DSN1Q9H410 356 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 REEP1Q9H902 201 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 SLAMF7Q9NQ25 335 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 ACER3Q9NUN7 267 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 RAPGEFL1Q9UHV5 662 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 PCDHGA3Q9Y5H0 932 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 ORC6Q9Y5N6 252 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.44□□□□□ -0.9
MSH2-202ENST00000406134 PTHP01270 115 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 ADORA3P0DMS8 318 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 CDH3P22223 829 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 GADD45AP24522 165 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 PSMB9P28065 219 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 IRS1P35568 1242 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 HNF4AP41235 474 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 XCR1P46094 333 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 EPHA5P54756 1037 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 PUM1Q14671 1186 aaKnown RBP eCLIP9.44□□□□□ -0.9
MSH2-202ENST00000406134 INAQ16352 499 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 FAM71E1Q6IPT2 247 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 LIPIQ6XZB0 460 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 COMTD1Q86VU5 262 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 C12orf40Q86WS4 652 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 RAVER1Q8IY67 606 aaKnown RBP9.44□□□□□ -0.9
MSH2-202ENST00000406134 ZNF740Q8NDX6 193 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 GLYATL1Q969I3 302 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 MAGEB10Q96LZ2 347 aaPredicted RBP9.44□□□□□ -0.9
MSH2-202ENST00000406134 ZSWIM3Q96MP5 696 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 APOL4Q9BPW4 351 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 DMRT3Q9NQL9 472 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 GPR83Q9NYM4 423 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 FTSJ1Q9UET6 329 aa9.44□□□□□ -0.9
MSH2-202ENST00000406134 PNMA8BQ9ULN7 279 aaPredicted RBP9.44□□□□□ -0.9
MSH2-202ENST00000406134 SAP18O00422 153 aaKnown RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 PCDH17O14917 1159 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 C6orf47O95873 294 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 C8AP07357 584 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 PCSK2P16519 638 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 ZNF24P17028 368 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 SYN1P17600 705 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 HOXD10P28358 340 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 UGT2B10P36537 528 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 GSSP48637 474 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 WDR5P61964 334 aaKnown RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 SYT16Q17RD7 645 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 EXOC3L2Q2M3D2 409 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 PAGE2BQ5JRK9 111 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 PARS2Q7L3T8 475 aaKnown RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 SLC46A3Q7Z3Q1 461 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 ADGRF3Q8IZF5 1079 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 NLGN4XQ8N0W4 816 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 ATG16L2Q8NAA4 619 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 OR4A15Q8NGL6 344 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 CLP1Q92989 425 aaKnown RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 ERLEC1Q96DZ1 483 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 COQ10AQ96MF6 247 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 SDHCQ99643 169 aaPredicted RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 CDADC1Q9BWV3 514 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 BHLHE41Q9C0J9 482 aaPredicted RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 TMEM38AQ9H6F2 299 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 FAM227AF5H4B4 570 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 CCL16O15467 120 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 CBLP22681 906 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 SLC15A1P46059 708 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 LIM2P55344 173 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 MEF2AQ02078 507 aaPredicted RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 ACSM2AQ08AH3 577 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 TMEM115Q12893 351 aaPredicted RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 SLC5A12Q1EHB4 618 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 POM121L1PQ3SYA9 428 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 SPIN4Q56A73 249 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 AGAP7PQ5VUJ5 663 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 ACSM2BQ68CK6 577 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 FAM180BQ6P0A1 224 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 ATCAYQ86WG3 371 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 ZNF366Q8N895 744 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 FBXO15Q8NCQ5 510 aaPredicted RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 IPCEF1Q8WWN9 437 aaPredicted RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 IRF7Q92985 503 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 SLC38A4Q969I6 547 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 CAPNS2Q96L46 248 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 ZSCAN5AQ9BUG6 496 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 SORBS1Q9BX66 1292 aaKnown RBP9.43□□□□□ -0.9
MSH2-202ENST00000406134 ITPAQ9BY32 194 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 TAAR2Q9P1P5 351 aa9.43□□□□□ -0.9
MSH2-202ENST00000406134 SLC25A13Q9UJS0 675 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms