RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 OLR1P78380 273 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 PPP1R8Q12972 351 aaKnown RBP8.73□□□□□ -1.01
LIG4-202ENST00000405925 RIPK1Q13546 671 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 ARHGAP19Q14CB8 494 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 NEDD8Q15843 81 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 RPE65Q16518 533 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 KHDRBS2Q5VWX1 349 aaKnown RBP8.73□□□□□ -1.01
LIG4-202ENST00000405925 FAM180BQ6P0A1 224 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 ZNF730Q6ZMV8 503 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 TTLL10Q6ZVT0 673 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 GALNT5Q7Z7M9 940 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 CBR4Q8N4T8 237 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 WDR60Q8WVS4 1066 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 RELTQ969Z4 430 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 ASB9Q96DX5 294 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 PTCHD1Q96NR3 888 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 TMEM27Q9HBJ8 222 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 MS4A12Q9NXJ0 267 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 CDV3Q9UKY7 258 aaKnown RBP8.73□□□□□ -1.01
LIG4-202ENST00000405925 MYRFQ9Y2G1 1151 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 AP4B1Q9Y6B7 739 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 TNFRSF11BO00300 401 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 PRKD3O94806 890 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 TNFAIP8O95379 198 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 CCNA2P20248 432 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 PEX2P28328 305 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 IMPA1P29218 277 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 IL12BP29460 328 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 XKP51811 444 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 CDC42P60953 191 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 PPP2CBP62714 309 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 PPP2CAP67775 309 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 SIM1P81133 766 aaPredicted RBP8.73□□□□□ -1.01
LIG4-202ENST00000405925 ZNF267Q14586 743 aaPredicted RBP8.73□□□□□ -1.01
LIG4-202ENST00000405925 NANOGP8Q6NSW7 305 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 TMEM207Q6UWW9 146 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 TRIM69Q86WT6 500 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 BPIFB6Q8NFQ5 453 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 RASSF5Q8WWW0 418 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 ANKRD27Q96NW4 1050 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 BTBD9Q96Q07 612 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 EXO5Q9H790 373 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 NANOGQ9H9S0 305 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 TRNAU1APQ9NX07 287 aaKnown RBP8.73□□□□□ -1.01
LIG4-202ENST00000405925 LYARQ9NX58 379 aaKnown RBP8.73□□□□□ -1.01
LIG4-202ENST00000405925 EURLQ9NYK6 297 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 C5AR2Q9P296 337 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 MAP10Q9P2G4 905 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 P2RX2Q9UBL9 471 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 IKZF3Q9UKT9 509 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 POLR1DQ9Y2S0 133 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 PLEKHM1Q9Y4G2 1056 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 ENTPD2Q9Y5L3 495 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 MTCH2Q9Y6C9 303 aa8.73□□□□□ -1.01
LIG4-202ENST00000405925 AREL1O15033 823 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 TFPIP10646 304 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 CD247P20963 164 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 PIK3CBP42338 1070 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 HK3P52790 923 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 MAZP56270 477 aaKnown RBP8.72□□□□□ -1.01
LIG4-202ENST00000405925 CLDN8P56748 225 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 TAP2Q03519 686 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 CCSMST1Q4G0I0 132 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 TYW3Q6IPR3 259 aaKnown RBP8.72□□□□□ -1.01
LIG4-202ENST00000405925 LCTLQ6UWM7 567 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 NRROSQ86YC3 692 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 OR4N5Q8IXE1 308 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.72□□□□□ -1.01
LIG4-202ENST00000405925 RNF175Q8N4F7 328 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 FRS2Q8WU20 508 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 TSPEARQ8WU66 669 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 CDX2Q99626 313 aaPredicted RBP8.72□□□□□ -1.01
LIG4-202ENST00000405925 GDF15Q99988 308 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 C1QTNF1Q9BXJ1 281 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 P2RY12Q9H244 342 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 CUEDC1Q9NWM3 386 aaPredicted RBP8.72□□□□□ -1.01
LIG4-202ENST00000405925 TAS2R9Q9NYW1 312 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 A0A1B0GVT2 93 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 AQP12BA6NM10 295 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 CISD3P0C7P0 127 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 SAGP10523 405 aaPredicted RBP8.72□□□□□ -1.01
LIG4-202ENST00000405925 MAPK10P53779 464 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 KIR2DS3Q14952 304 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 CDKN3Q16667 212 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 TMEM35AQ53FP2 167 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 TNFAIP8L3Q5GJ75 292 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 VN1R5Q7Z5H4 357 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 GPR141Q7Z602 305 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 RNF130Q86XS8 419 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 AQP12AQ8IXF9 295 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 FAM47BQ8NA70 645 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 SMYD1Q8NB12 490 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 ECHDC3Q96DC8 303 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 CENPNQ96H22 339 aaPredicted RBP8.72□□□□□ -1.01
LIG4-202ENST00000405925 C3orf30Q96M34 536 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 PRTFDC1Q9NRG1 225 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 HCN3Q9P1Z3 774 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 TPRKBQ9Y3C4 175 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 E2F3O00716 465 aa8.72□□□□□ -1.01
LIG4-202ENST00000405925 UGDHO60701 494 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms