RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 DDX5P17844 614 aaKnown RBP20.04■□□□□ 0.8
TPM1-208ENST00000404484 KIR3DL1P43629 444 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 ZIC1Q15915 447 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 DEFB133Q30KQ1 61 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 C14orf28Q4W4Y0 310 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 PAGE3Q5JUK9 113 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 DHDDSQ86SQ9 333 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 GPR180Q86V85 440 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 GATAD2AQ86YP4 633 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 PLD3Q8IV08 490 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 SRFBP1Q8NEF9 429 aaKnown RBP20.04■□□□□ 0.8
TPM1-208ENST00000404484 CDC26Q8NHZ8 85 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 SAP25Q8TEE9 199 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 EGLN2Q96KS0 407 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 SLC38A3Q99624 504 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 MYNNQ9NPC7 610 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 TMEM181Q9P2C4 612 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 BCAP29Q9UHQ4 241 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 A8MUI8 341 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 FXYD1O00168 92 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 TRIM38O00635 465 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 PLPP1O14494 284 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 SCAMP2O15127 329 aaKnown RBP20.04■□□□□ 0.8
TPM1-208ENST00000404484 CAPN5O15484 640 aaPredicted RBP20.04■□□□□ 0.8
TPM1-208ENST00000404484 SDC3O75056 442 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 PDE5AO76074 875 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 UBXN7O94888 489 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 SERPIND1P05546 499 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 COX7A2P14406 83 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 ME2P23368 584 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 TGM3Q08188 693 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 PWP1Q13610 501 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 SLC2A7Q6PXP3 512 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 FIGLAQ6QHK4 219 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 R3HCC1LQ7Z5L2 792 aaKnown RBP20.04■□□□□ 0.8
TPM1-208ENST00000404484 NUDT13Q86X67 352 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 WDR48Q8TAF3 677 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 ITCHQ96J02 903 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 F2RL3Q96RI0 385 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 REXO4Q9GZR2 422 aaKnown RBP20.04■□□□□ 0.8
TPM1-208ENST00000404484 IL1RL2Q9HB29 575 aa20.04■□□□□ 0.8
TPM1-208ENST00000404484 LRIT2A6NDA9 550 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 LRATO95237 230 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 TBX6O95947 436 aaPredicted RBP20.03■□□□□ 0.8
TPM1-208ENST00000404484 KLK1P06870 262 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 MAGP20916 626 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 STXBP1P61764 594 aaKnown RBP20.03■□□□□ 0.8
TPM1-208ENST00000404484 RGS1Q08116 209 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 HKDC1Q2TB90 917 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 PGS1Q32NB8 556 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 FBXW10Q5XX13 1052 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 CAMKMTQ7Z624 323 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 TRIM73Q86UV7 250 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 HPS6Q86YV9 775 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 TMEM132CQ8N3T6 1108 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 OR8J2Q8NGG1 315 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 RHBDD1Q8TEB9 315 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 MTERF3Q96E29 417 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 FAM120CQ9NX05 1096 aaKnown RBP20.03■□□□□ 0.8
TPM1-208ENST00000404484 ABCD2Q9UBJ2 740 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 POMT2Q9UKY4 750 aa20.03■□□□□ 0.8
TPM1-208ENST00000404484 SPAARA0A1B0GVQ0 90 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 PPM1DO15297 605 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 YKT6O15498 198 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 FLRT2O43155 660 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 AKAP10O43572 662 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 ERN1O75460 977 aaKnown RBP20.02■□□□□ 0.8
TPM1-208ENST00000404484 SLC7A2P52569 658 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 HNRNPFP52597 415 aaKnown RBP20.02■□□□□ 0.8
TPM1-208ENST00000404484 EPHA4P54764 986 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 LRRC74AQ0VAA2 488 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 KPNB1Q14974 876 aaKnown RBP20.02■□□□□ 0.8
TPM1-208ENST00000404484 ADPRMQ3LIE5 342 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 C6orf132Q5T0Z8 1188 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 CCNYL2Q5T2Q4 361 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 RIPOR1Q6ZS17 1223 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 ZNF761Q86XN6 746 aaPredicted RBP20.02■□□□□ 0.8
TPM1-208ENST00000404484 C16orf78Q8WTQ4 265 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 GTF2H4Q92759 462 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 GFM2Q969S9 779 aaKnown RBP20.02■□□□□ 0.8
TPM1-208ENST00000404484 CCDC124Q96CT7 223 aaKnown RBP20.02■□□□□ 0.8
TPM1-208ENST00000404484 REEP4Q9H6H4 257 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 ATAD3AQ9NVI7 634 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 UCKL1Q9NWZ5 548 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 ATP6V1HQ9UI12 483 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 POMPQ9Y244 141 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 MAN2B2Q9Y2E5 1009 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 KLHL20Q9Y2M5 609 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 AP3M1Q9Y2T2 418 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 L3MBTL1Q9Y468 752 aa20.02■□□□□ 0.8
TPM1-208ENST00000404484 SNRNP200O75643 2136 aaKnown RBP20.02■□□□□ 0.79
TPM1-208ENST00000404484 PROS1P07225 676 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 SLC35G6P0C7Q6 338 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 EPHA8P29322 1005 aaPredicted RBP20.01■□□□□ 0.79
TPM1-208ENST00000404484 BSGP35613 385 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 TSFMP43897 325 aaKnown RBP20.01■□□□□ 0.79
TPM1-208ENST00000404484 CAPZBP47756 277 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 MAPK12P53778 367 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 ACTR3P61158 418 aa20.01■□□□□ 0.79
TPM1-208ENST00000404484 CYP4F3Q08477 520 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms