RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 MAGEB10Q96LZ2 347 aaPredicted RBP17.13■□□□□ 0.33
PTPRN2-204ENST00000404321 ZNF700Q9H0M5 742 aa17.13■□□□□ 0.33
PTPRN2-204ENST00000404321 LANCL2Q9NS86 450 aa17.13■□□□□ 0.33
PTPRN2-204ENST00000404321 PTGFRNQ9P2B2 879 aa17.13■□□□□ 0.33
PTPRN2-204ENST00000404321 FAM227AF5H4B4 570 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 K7EPI3 171 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 ERI3O43414 337 aaKnown RBP17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 KLHL41O60662 606 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 SH3BGRLO75368 114 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 KRT38O76015 456 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 SERPINA7P05543 415 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 UQCRHP07919 91 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 FHP07954 510 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 SMIM10L1P0DMW3 83 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 PLA2G16P53816 162 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 STXBP1P61764 594 aaKnown RBP17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 SKP1P63208 163 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 RHAGQ02094 409 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 NSDHLQ15738 373 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 TRMT10CQ7L0Y3 403 aaKnown RBP17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 MYLK4Q86YV6 388 aaPredicted RBP17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 CPT1CQ8TCG5 803 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 PNPLA2Q96AD5 504 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 MS4A6EQ96DS6 147 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 WDR34Q96EX3 536 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 SMIM10Q96HG1 83 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 SCYL1Q96KG9 808 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 OR1F2PQ96R84 312 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 EFCAB11Q9BUY7 163 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 ILKAPQ9H0C8 392 aaPredicted RBP17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 CLMPQ9H6B4 373 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 NT5DC2Q9H857 520 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 B3GNT3Q9Y2A9 372 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 ANGPTL3Q9Y5C1 460 aa17.12■□□□□ 0.33
PTPRN2-204ENST00000404321 A0A1W2PQ72 361 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 LRIT2A6NDA9 550 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 RIPK2O43353 540 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 SIX3O95343 332 aaPredicted RBP17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 TBX6O95947 436 aaPredicted RBP17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 ITGAMP11215 1152 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 PCNAP12004 261 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 MAGEA12P43365 314 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 BTG2P78543 158 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 SETDB1Q15047 1291 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 HIST2H2ACQ16777 129 aaPredicted RBP17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 TECRLQ5HYJ1 363 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 PAGE2BQ5JRK9 111 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 HIST2H2AA3Q6FI13 130 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 IGFL3Q6UXB1 125 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 ISLR2Q6UXK2 745 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 CA13Q8N1Q1 262 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 GAL3ST3Q96A11 431 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 ISL2Q96A47 359 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 MIB2Q96AX9 1013 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 FAR2Q96K12 515 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 CNDP1Q96KN2 507 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 F2RL3Q96RI0 385 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 COPG2Q9UBF2 871 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 C19orf25Q9UFG5 118 aaPredicted RBP17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 ZNF180Q9UJW8 692 aa17.11■□□□□ 0.33
PTPRN2-204ENST00000404321 NBASA2RRP1 2371 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 SPENQ96T58 3664 aaKnown RBP17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 SCN3AQ9NY46 2000 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 PSMD12O00232 456 aaPredicted RBP17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 PCDH17O14917 1159 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 CLEC3AO75596 197 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 WFS1O76024 890 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 F10P00742 488 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 ABHD2P08910 425 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 MYBL2P10244 700 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 EPB42P16452 691 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 IL10P22301 178 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 GCAP28676 217 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 LAPTM5Q13571 262 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 INPP5JQ15735 1006 aaPredicted RBP17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 TBCCQ15814 346 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 SFT2D3Q587I9 215 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 B3GNTL1Q67FW5 361 aaPredicted RBP17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 NIPAL1Q6NVV3 410 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 PSMF1Q92530 271 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 IMMP1LQ96LU5 166 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 TUBB6Q9BUF5 446 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 PITHD1Q9GZP4 211 aaPredicted RBP17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 REXO4Q9GZR2 422 aaKnown RBP17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 L2HGDHQ9H9P8 463 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 PLA2G3Q9NZ20 509 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 XPR1Q9UBH6 696 aa17.1■□□□□ 0.33
PTPRN2-204ENST00000404321 MAGEB17A8MXT2 336 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 RNH1P13489 461 aaKnown RBP17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 MAOAP21397 527 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 JAK1P23458 1154 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 CNTFP26441 200 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 GSTM2P28161 218 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 ALDH18A1P54886 795 aaKnown RBP17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 ACTN3Q08043 901 aaPredicted RBP17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 DDX39BQ13838 428 aaKnown RBP17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 RUNX2Q13950 521 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 NAA30Q147X3 362 aaPredicted RBP17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 BTBD16Q32M84 506 aa17.09■□□□□ 0.33
PTPRN2-204ENST00000404321 CUZD1Q86UP6 607 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms