RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 FAM133BQ5BKY9 247 aaKnown RBP4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 TCTE1Q5JU00 501 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 CCDC183Q5T5S1 534 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 SLC27A1Q6PCB7 646 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 RBMS3Q6XE24 437 aaKnown RBP4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 RBM43Q6ZSC3 357 aaKnown RBP4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 ARMCX2Q7L311 632 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 TRMT1LQ7Z2T5 733 aaKnown RBP4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 TRPT1Q86TN4 253 aaKnown RBP4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 MAPKAPK5-AS1Q8N8E1 139 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 ZNF383Q8NA42 475 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 IQUBQ8NA54 791 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 THAP8Q8NA92 274 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 MOB3AQ96BX8 217 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 THOC1Q96FV9 657 aaKnown RBP4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 ERO1AQ96HE7 468 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 EPSTI1Q96J88 318 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 UHRF2Q96PU4 802 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 LAT2Q9GZY6 243 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 NT5C3AQ9H0P0 336 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 FZD8Q9H461 694 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 MAGEF1Q9HAY2 307 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 TUFT1Q9NNX1 390 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 GKN1Q9NS71 199 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 CACNG4Q9UBN1 327 aa4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 HOOK1Q9UJC3 728 aaKnown RBP4.52□□□□□ -1.69
HMGB3P19-201ENST00000403971 A0A087WYN8 130 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 IGLV9-49A0A0B4J1Y8 123 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 POLR2DO15514 142 aaKnown RBP4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 AP5Z1O43299 807 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 RNASEH1O60930 286 aaKnown RBP4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 ATP9AO75110 1047 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 SLITRK3O94933 977 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 LYPLA2O95372 231 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 SNAI1O95863 264 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 QDPRP09417 244 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 FRMD6-AS1P0C7T7 363 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 LIFP15018 202 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 HOXB6P17509 224 aaKnown RBP4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 CA4P22748 312 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 TIMP3P35625 211 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 CCT6AP40227 531 aaKnown RBP4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 ASCL1P50553 236 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 LIMK1P53667 647 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 UBASH3AP57075 661 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 ITGB3BPQ13352 177 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 VEZF1Q14119 521 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 ZNF273Q14593 569 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 CELF3Q5SZQ8 465 aaKnown RBP4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 SFMBT2Q5VUG0 894 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 C11orf63Q6NUN7 778 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 TRAT1Q6PIZ9 186 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 METTL7BQ6UX53 244 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 TLK2Q86UE8 772 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 CUZD1Q86UP6 607 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 DCUN1D3Q8IWE4 304 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 CDK20Q8IZL9 346 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 CCAR2Q8N163 923 aaKnown RBP4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 KBTBD8Q8NFY9 601 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 CCDC107Q8WV48 283 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 EXT2Q93063 718 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 ZNF524Q96C55 264 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 NAF1Q96HR8 494 aaKnown RBP4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 RAD9AQ99638 391 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 HSD17B14Q9BPX1 270 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 KRTAP9-8Q9BYQ0 159 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 TNMDQ9H2S6 317 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 CLSTN2Q9H4D0 955 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 SDR39U1Q9NRG7 319 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 TBC1D7Q9P0N9 293 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 ZDHHC2Q9UIJ5 367 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 Q9Y3F1 56 aa4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 KIAA0100Q14667 2235 aaKnown RBP4.51□□□□□ -1.69
HMGB3P19-201ENST00000403971 IGKV6D-21A0A0A0MT36 114 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 LOC101059948A0A1B0GTJ6 334 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 A0A1W2PPK0 400 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 PP2D1A8MPX8 630 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 CLDN4O14493 209 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 PIGNO95427 931 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 CCNE2O96020 404 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 GH1P01241 217 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 PRSS1P07477 247 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 GLULP15104 373 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 CYP2B6P20813 491 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 PTGER4P35408 488 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 QARSP47897 775 aaKnown RBP4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 SLC26A2P50443 739 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 PSMC5P62195 406 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 PPARDQ03181 441 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 ITGA7Q13683 1181 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 KARSQ15046 597 aaKnown RBP4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 UGT3A2Q3SY77 523 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 MFSD14CQ5VZR4 134 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 CAVIN1Q6NZI2 390 aaKnown RBP4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 SHQ1Q6PI26 577 aaKnown RBP4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 ERN2Q76MJ5 926 aaKnown RBP4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 MIER3Q7Z3K6 550 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 ISCA2Q86U28 154 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 RTN4RL2Q86UN3 420 aa4.5□□□□□ -1.69
HMGB3P19-201ENST00000403971 CATSPER3Q86XQ3 398 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms