RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 ACTL7AQ9Y615 435 aa13.46□□□□□ -0.25
HMGA2-204ENST00000403681 GOLGB1Q14789 3259 aaKnown RBP13.46□□□□□ -0.25
HMGA2-204ENST00000403681 A0A0U1RQS6 177 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 OR2AG2A6NM03 316 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 SAP18O00422 153 aaKnown RBP13.46□□□□□ -0.26
HMGA2-204ENST00000403681 PRMT3O60678 531 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 CLDN7O95471 211 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 PTPN2P17706 415 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 ZNF81P51508 661 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 RPA4Q13156 261 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 VARS2Q5ST30 1063 aaKnown RBP13.46□□□□□ -0.26
HMGA2-204ENST00000403681 KDM4DQ6B0I6 523 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 PLAG1Q6DJT9 500 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 GDPGP1Q6ZNW5 385 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 SCD5Q86SK9 330 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 PLCZ1Q86YW0 608 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 PHYKPLQ8IUZ5 450 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 YIPF7Q8N8F6 280 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 DPF3Q92784 378 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 APIPQ96GX9 242 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 HTATIP2Q9BUP3 242 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 ZNF639Q9UID6 485 aa13.46□□□□□ -0.26
HMGA2-204ENST00000403681 TRAV6A0A075B6T7 132 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 OR7A10O76100 309 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 PRG2P13727 222 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 AKR1A1P14550 325 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 RPS5P46782 204 aaKnown RBP13.45□□□□□ -0.26
HMGA2-204ENST00000403681 TAS2R41P59536 307 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 PPP3R1P63098 170 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 ATP13A5Q4VNC0 1218 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 SLX4IPQ5VYV7 408 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 ADGRD2Q7Z7M1 963 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 UBQLNLQ8IYU4 475 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 ZNF566Q969W8 418 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 SUSD3Q96L08 255 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 ERMAPQ96PL5 475 aaPredicted RBP13.45□□□□□ -0.26
HMGA2-204ENST00000403681 SMIM14Q96QK8 99 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 EPYCQ99645 322 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 PIP5K1AQ99755 562 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 ASPDHA6ND91 283 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 ATXN8OSP0DMR3 200 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 HTR3AP46098 478 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 TRIM71Q2Q1W2 868 aaKnown RBP13.45□□□□□ -0.26
HMGA2-204ENST00000403681 LRRTM3Q86VH5 581 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 TRAPPC5Q8IUR0 188 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 IZUMO1Q8IYV9 350 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 SMG7Q92540 1137 aaKnown RBP13.45□□□□□ -0.26
HMGA2-204ENST00000403681 FKBP10Q96AY3 582 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 KCNN2Q9H2S1 579 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 KLK4Q9Y5K2 254 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 GSAPA4D1B5 854 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 I6L893 689 aaPredicted RBP13.45□□□□□ -0.26
HMGA2-204ENST00000403681 GBAP04062 536 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 LAMP1P11279 417 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 DSTNP60981 165 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 RPL6Q02878 288 aaKnown RBP13.45□□□□□ -0.26
HMGA2-204ENST00000403681 C8orf82Q6P1X6 216 aaPredicted RBP13.45□□□□□ -0.26
HMGA2-204ENST00000403681 CDK20Q8IZL9 346 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 HRASLS5Q96KN8 279 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 CHIAQ9BZP6 476 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 TAS2R16Q9NYV7 291 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 TEX28O15482 410 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 KDELR3O43731 214 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 KCNK2O95069 426 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 C6orf47O95873 294 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 HLA-DPB1P04440 258 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 SDC1P18827 310 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 IFITM3Q01628 133 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 NKG7Q16617 165 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 UPP1Q16831 310 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 ZNF630Q2M218 657 aaPredicted RBP13.45□□□□□ -0.26
HMGA2-204ENST00000403681 ZNF730Q6ZMV8 503 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 CBLL1Q75N03 491 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 ZNF598Q86UK7 904 aaKnown RBP13.45□□□□□ -0.26
HMGA2-204ENST00000403681 MRPS31Q92665 395 aaKnown RBP13.45□□□□□ -0.26
HMGA2-204ENST00000403681 RFKQ969G6 155 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 QRFPRQ96P65 431 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 IKZF5Q9H5V7 419 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 C3orf14Q9HBI5 128 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 CD84Q9UIB8 345 aa13.45□□□□□ -0.26
HMGA2-204ENST00000403681 F2P00734 622 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 DDOSTP39656 456 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 TATDN3Q17R31 274 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 SUSD1Q6UWL2 747 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 OR8J1Q8NGP2 316 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 COQ8BQ96D53 544 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 FYTTD1Q96QD9 318 aaKnown RBP13.44□□□□□ -0.26
HMGA2-204ENST00000403681 GTPBP2Q9BX10 602 aaKnown RBP13.44□□□□□ -0.26
HMGA2-204ENST00000403681 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 HOXC11O43248 304 aaPredicted RBP13.44□□□□□ -0.26
HMGA2-204ENST00000403681 CACNG3O60359 315 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 ETFAP13804 333 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 ZNF140P52738 457 aaPredicted RBP13.44□□□□□ -0.26
HMGA2-204ENST00000403681 VEZF1Q14119 521 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 UBXN11Q5T124 520 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 KRT78Q8N1N4 520 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 BOCQ9BWV1 1114 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 ACPTQ9BZG2 426 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 GKN1Q9NS71 199 aa13.44□□□□□ -0.26
HMGA2-204ENST00000403681 TRAV19A0A0A6YYK7 116 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms