RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 RXRGP48443 463 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 DAPP51397 102 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 CCR8P51685 355 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 CLCNKAP51800 687 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 RPS6KA3P51812 740 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 KCNJ10P78508 379 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 FADDQ13158 208 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 COX20Q5RI15 118 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 GPR107Q5VW38 600 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 KDM4DQ6B0I6 523 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 TRIM40Q6P9F5 258 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 RAB42Q8N4Z0 105 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 ZNF513Q8N8E2 541 aaPredicted RBP17.12■□□□□ 0.33
CHTOP-205ENST00000403433 SMPDL3AQ92484 453 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 SORBS1Q9BX66 1292 aaKnown RBP17.12■□□□□ 0.33
CHTOP-205ENST00000403433 RHBGQ9H310 441 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 RAD21L1Q9H4I0 556 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 WASH6PQ9NQA3 447 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 MBNL1Q9NR56 388 aaKnown RBP17.12■□□□□ 0.33
CHTOP-205ENST00000403433 THUMPD1Q9NXG2 353 aaKnown RBP17.12■□□□□ 0.33
CHTOP-205ENST00000403433 TAS2R9Q9NYW1 312 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 ACSL6Q9UKU0 697 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 LAMA3Q16787 3333 aa17.12■□□□□ 0.33
CHTOP-205ENST00000403433 A0A1W2PRB8 838 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 DPM1O60762 260 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 C9P02748 559 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 SERPINB1P30740 379 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 GDI1P31150 447 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 POLR2IP36954 125 aaKnown RBP17.11■□□□□ 0.33
CHTOP-205ENST00000403433 MVDP53602 400 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 CRYBA2P53672 197 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 ISL1P61371 349 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 CYP4F2P78329 520 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 IL5RAQ01344 420 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 RBBP4Q09028 425 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 AGERQ15109 404 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 MPEG1Q2M385 716 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 CNDP2Q96KP4 475 aaKnown RBP17.11■□□□□ 0.33
CHTOP-205ENST00000403433 PHPT1Q9NRX4 125 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-205ENST00000403433 SERGEFQ9UGK8 458 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 ACSL5Q9ULC5 683 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 DOCK8Q8NF50 2099 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 TNFRSF21O75509 655 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 CYP4B1P13584 511 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 GSTM2P28161 218 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 TEAD1P28347 426 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 TPP2P29144 1249 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-205ENST00000403433 PRIM2P49643 509 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 CASP9P55211 416 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 NUP107P57740 925 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 CTBSQ01459 385 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 ENPP2Q13822 863 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 SCARB2Q14108 478 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 NUMA1Q14980 2115 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 ITPRIPL2Q3MIP1 535 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 KHDRBS2Q5VWX1 349 aaKnown RBP17.11■□□□□ 0.33
CHTOP-205ENST00000403433 DUS1LQ6P1R4 473 aaKnown RBP17.11■□□□□ 0.33
CHTOP-205ENST00000403433 ATG16L2Q8NAA4 619 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 MAGED4Q96JG8 741 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 EPYCQ99645 322 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 RUBCNLQ9H714 662 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 GPATCH2Q9NW75 528 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 CUEDC1Q9NWM3 386 aaPredicted RBP17.11■□□□□ 0.33
CHTOP-205ENST00000403433 PADI2Q9Y2J8 665 aa17.11■□□□□ 0.33
CHTOP-205ENST00000403433 SLC1A7O00341 560 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 PLPP1O14494 284 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 JRKO75564 520 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 KRT75O95678 551 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 ACP5P13686 325 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 AGXTP21549 392 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 MAPK12P53778 367 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 REEP5Q00765 189 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 RAPSNQ13702 412 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 KEAP1Q14145 624 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 ZNF776Q68DI1 518 aaPredicted RBP17.1■□□□□ 0.33
CHTOP-205ENST00000403433 PAGE2Q7Z2X7 111 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 ABHD11Q8NFV4 315 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 OR13F1Q8NGS4 319 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 OR5AK3PQ8NH89 298 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 SPPL2AQ8TCT8 520 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 C7orf34Q96L11 122 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 MYADMQ96S97 322 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 DOK1Q99704 481 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 MENTQ9BUN1 341 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 MS4A8Q9BY19 250 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 OSGEPL1Q9H4B0 414 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 TMEM38AQ9H6F2 299 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 KRT84Q9NSB2 600 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 EXD2Q9NVH0 621 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 TMEM9Q9P0T7 183 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 SNX5Q9Y5X3 404 aa17.1■□□□□ 0.33
CHTOP-205ENST00000403433 H3BMQ9 156 aa17.09■□□□□ 0.33
CHTOP-205ENST00000403433 PSMB5P28074 263 aa17.09■□□□□ 0.33
CHTOP-205ENST00000403433 SELENOWP63302 87 aa17.09■□□□□ 0.33
CHTOP-205ENST00000403433 ELOAQ14241 798 aaKnown RBP17.09■□□□□ 0.33
CHTOP-205ENST00000403433 SHHQ15465 462 aa17.09■□□□□ 0.33
CHTOP-205ENST00000403433 DEPDC1Q5TB30 811 aa17.09■□□□□ 0.33
CHTOP-205ENST00000403433 RNF130Q86XS8 419 aa17.09■□□□□ 0.33
CHTOP-205ENST00000403433 SPARTQ8N0X7 666 aa17.09■□□□□ 0.33
CHTOP-205ENST00000403433 NFKBIDQ8NI38 313 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms