RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 RAB26Q9ULW5 256 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 LMO7Q8WWI1 1683 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 A0A1B0GVT2 93 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 LCHNA4D1U4 455 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 RAB36O95755 333 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 PLATP00750 562 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 ETS2P15036 469 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 CRISP1P54107 249 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 DPYSQ14117 519 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 CDCA3Q99618 268 aaPredicted RBP10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 ZDHHC18Q9NUE0 388 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 TBCCD1Q9NVR7 557 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 C14orf166Q9Y224 244 aaKnown RBP10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 WDR37Q9Y2I8 494 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 TMEM184BQ9Y519 407 aaPredicted RBP10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 LRRC37A3O60309 1634 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF705FA8MVS1 300 aaPredicted RBP10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 PCDH7O60245 1069 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 WDPCPO95876 746 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF705DP0CH99 300 aaPredicted RBP10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF705BP0CI00 300 aaPredicted RBP10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 ATP1B2P14415 290 aaPredicted RBP10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF12P17014 697 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 DCKP27707 260 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 APLNRP35414 380 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 SLC25A3Q00325 362 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 PMS2P3Q13401 168 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 IL17AQ16552 155 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 CDKN3Q16667 212 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 MCFD2Q8NI22 146 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 GPATCH1Q9BRR8 931 aaKnown RBP10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 CADM1Q9BY67 442 aaKnown RBP10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 FAM124BQ9H5Z6 455 aaPredicted RBP10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 TBC1D17Q9HA65 648 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 CNOT11Q9UKZ1 510 aaKnown RBP10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 STXBP5LQ9Y2K9 1186 aa10.62□□□□□ -0.71
CACNA1C-216ENST00000399638 TNFRSF11BO00300 401 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 LRCH4O75427 683 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 LRIG2O94898 1065 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 EIF4EP06730 217 aaKnown RBP10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 RPS17P08708 135 aaKnown RBP10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 CD46P15529 392 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 SHMT2P34897 504 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 LIPEQ05469 1076 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 LMAN2Q12907 356 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 TCEAL1Q15170 157 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 LIPMQ5VYY2 423 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 TMEM234Q8WY98 164 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 C7orf26Q96N11 449 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 UHRF1Q96T88 793 aaPredicted RBP10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 ACTL8Q9H568 366 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 GPR160Q9UJ42 338 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 PLSCR5A0PG75 271 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 MATN2O00339 956 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 ADAP00813 363 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 TGM1P22735 817 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 GDF1P27539 372 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 MARCKSL1P49006 195 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 ZNF45Q02386 682 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 CHRNEQ04844 493 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 FAM83HQ6ZRV2 1179 aaPredicted RBP10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 WDR53Q7Z5U6 358 aaPredicted RBP10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 CPNE9Q8IYJ1 553 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 SPATA22Q8NHS9 363 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 LNX1Q8TBB1 728 aaPredicted RBP10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 KCTD13Q8WZ19 329 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 OTUB2Q96DC9 234 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 RBP7Q96R05 134 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 CNTN3Q9P232 1028 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 MAGED1Q9Y5V3 778 aaPredicted RBP10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 SH3PXD2BA1X283 911 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 FADS2P1A8MWK0 482 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 IQCF3P0C7M6 154 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 VIPR2P41587 438 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 OR12D2P58182 307 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 NPRL3Q12980 569 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 ZFP69Q49AA0 526 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 MFSD2AQ8NA29 543 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 DAZLQ92904 295 aaKnown RBP10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 DNTTIP1Q9H147 329 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 ARL8BQ9NVJ2 186 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 LYARQ9NX58 379 aaKnown RBP10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 ZDHHC3Q9NYG2 299 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 TLR6Q9Y2C9 796 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 PCDHGA11Q9Y5H2 935 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 ASTN1O14525 1302 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 KANTRA0A1W2PQU2 76 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 ARGFXA6NJG6 315 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 CRISP3P54108 245 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 HHEXQ03014 270 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 C11orf91Q3C1V1 193 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 TEX44Q53QW1 395 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 SPATA19Q7Z5L4 167 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 TRIM74Q86UV6 250 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 MYLIPQ8WY64 445 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 TUBGCP5Q96RT8 1024 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 DUSP23Q9BVJ7 150 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 XKR8Q9H6D3 395 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 SPHK2Q9NRA0 654 aa10.61□□□□□ -0.71
CACNA1C-216ENST00000399638 HSBP1L1C9JCN9 74 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms