RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 HSD3B2P26439 372 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 ITPKBP27987 946 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 ALDH3A1P30838 453 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 ARL1P40616 181 aaPredicted RBP16.75■□□□□ 0.27
CTNS-203ENST00000399306 OCA2Q04671 838 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 IFT88Q13099 833 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 NKG7Q16617 165 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 TOR1AIP1Q5JTV8 583 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 LETMD1Q6P1Q0 360 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 VASH2Q86V25 355 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 CCNYL1Q8N7R7 359 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 ENDOVQ8N8Q3 282 aaKnown RBP16.75■□□□□ 0.27
CTNS-203ENST00000399306 AMER3Q8N944 861 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 OR9A4Q8NGU2 314 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 OR2Y1Q8NGV0 311 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 AGAP11Q8TF27 550 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 STARD8Q92502 1023 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 IP6K3Q96PC2 410 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 KCNC2Q96PR1 638 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 MACROD1Q9BQ69 325 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 TBCDQ9BTW9 1192 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 GATA5Q9BWX5 397 aaPredicted RBP16.75■□□□□ 0.27
CTNS-203ENST00000399306 ACBD3Q9H3P7 528 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 ACTL8Q9H568 366 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 IL17BQ9UHF5 180 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 MRPS2Q9Y399 296 aaKnown RBP16.75■□□□□ 0.27
CTNS-203ENST00000399306 NAALAD2Q9Y3Q0 740 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 CCDC88CQ9P219 2028 aa16.75■□□□□ 0.27
CTNS-203ENST00000399306 DSPP15924 2871 aaKnown RBP16.74■□□□□ 0.27
CTNS-203ENST00000399306 SEMA3DO95025 777 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 IGHEP01854 428 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 KRT6AP02538 564 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 KRT6BP04259 564 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 ZNF888P0CJ79 500 aaPredicted RBP16.74■□□□□ 0.27
CTNS-203ENST00000399306 PCNAP12004 261 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 IL1RNP18510 177 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 HNRNPH1P31943 449 aaKnown RBP16.74■□□□□ 0.27
CTNS-203ENST00000399306 OR1D4P47884 311 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 SERPINB4P48594 390 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 KRT6CP48668 564 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 MAGOHP61326 146 aaKnown RBP16.74■□□□□ 0.27
CTNS-203ENST00000399306 SSPNQ14714 243 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 MLIPQ5VWP3 458 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 KHDRBS2Q5VWX1 349 aaKnown RBP16.74■□□□□ 0.27
CTNS-203ENST00000399306 TTC19Q6DKK2 380 aaPredicted RBP16.74■□□□□ 0.27
CTNS-203ENST00000399306 ABHD17CQ6PCB6 329 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 RNF165Q6ZSG1 346 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 PDSS2Q86YH6 399 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 GOLGA6L1Q8N7Z2 621 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 ZCCHC10Q8TBK6 192 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 ADAMTS18Q8TE60 1221 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 CCT6BQ92526 530 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 FAR2Q96K12 515 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 CATSPER2Q96P56 530 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 CDK15Q96Q40 435 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 OR1F2PQ96R84 312 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 SERPINI1Q99574 410 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 AICDAQ9GZX7 198 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 KLHL31Q9H511 634 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 ELOVL6Q9H5J4 265 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 KCNK9Q9NPC2 374 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 NMRK1Q9NWW6 199 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 CFAP47Q6ZTR5 3102 aa16.74■□□□□ 0.27
CTNS-203ENST00000399306 PPP6CO00743 305 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 ERI3O43414 337 aaKnown RBP16.73■□□□□ 0.27
CTNS-203ENST00000399306 OR4F21O95013 312 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 STATHP02808 62 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 FOLR3P41439 243 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 SLC9A5Q14940 896 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 UGT8Q16880 541 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 DEFB134Q4QY38 66 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 RPS27LQ71UM5 84 aaKnown RBP16.73■□□□□ 0.27
CTNS-203ENST00000399306 NUDCD3Q8IVD9 361 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 KIRREL3Q8IZU9 778 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 GBP7Q8N8V2 638 aaPredicted RBP16.73■□□□□ 0.27
CTNS-203ENST00000399306 STT3BQ8TCJ2 826 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.73■□□□□ 0.27
CTNS-203ENST00000399306 THAP4Q8WY91 577 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 RGMAQ96B86 450 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 ATP6V1G3Q96LB4 118 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 QRFPRQ96P65 431 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 SERINC2Q96SA4 455 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 SPSB2Q99619 263 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 PRORYQ9H606 182 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 EML4Q9HC35 981 aaKnown RBP16.73■□□□□ 0.27
CTNS-203ENST00000399306 MID1IP1Q9NPA3 183 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 MAU2Q9Y6X3 613 aa16.73■□□□□ 0.27
CTNS-203ENST00000399306 UQCRHLA0A096LP55 91 aa16.72■□□□□ 0.27
CTNS-203ENST00000399306 A0A1B0GTL3 188 aa16.72■□□□□ 0.27
CTNS-203ENST00000399306 TMEM120BA0PK00 339 aa16.72■□□□□ 0.27
CTNS-203ENST00000399306 SYNDIG1LA6NDD5 238 aa16.72■□□□□ 0.27
CTNS-203ENST00000399306 MAGEB17A8MXT2 336 aa16.72■□□□□ 0.27
CTNS-203ENST00000399306 HMGB1P1B2RPK0 211 aaPredicted RBP16.72■□□□□ 0.27
CTNS-203ENST00000399306 UQCRHP07919 91 aa16.72■□□□□ 0.27
CTNS-203ENST00000399306 ZGLP1P0C6A0 271 aa16.72■□□□□ 0.27
CTNS-203ENST00000399306 TSPAN8P19075 237 aa16.72■□□□□ 0.27
CTNS-203ENST00000399306 WT1P19544 449 aaPredicted RBP16.72■□□□□ 0.27
CTNS-203ENST00000399306 MTTPP55157 894 aa16.72■□□□□ 0.27
CTNS-203ENST00000399306 CSTF3Q12996 717 aaKnown RBP16.72■□□□□ 0.27
CTNS-203ENST00000399306 MPP2Q14168 576 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms