RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SPIBQ01892 262 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 LRRC74AQ0VAA2 488 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 IFI44LQ53G44 452 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 LACC1Q8IV20 430 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 OR4K1Q8NGD4 311 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 ERLEC1Q96DZ1 483 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 SAMD11Q96NU1 681 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 ZNF226Q9NYT6 803 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 ATP6V1HQ9UI12 483 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 NPC1O15118 1278 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 KDM1AO60341 852 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 UPK1BO75841 260 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 IDH2P48735 452 aaKnown RBP24.55■■□□□ 1.52
COL13A1-203ENST00000398969 NUDT6P53370 316 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 CDH12P55289 794 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 HENMT1Q5T8I9 393 aaKnown RBP24.55■■□□□ 1.52
COL13A1-203ENST00000398969 USP43Q70EL4 1123 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 GOT1L1Q8NHS2 421 aaPredicted RBP24.55■■□□□ 1.52
COL13A1-203ENST00000398969 TIFAQ96CG3 184 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 CXorf40BQ96DE9 158 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 NIPSNAP1Q9BPW8 284 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 GPR83Q9NYM4 423 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 WDR37Q9Y2I8 494 aa24.55■■□□□ 1.52
COL13A1-203ENST00000398969 PRAMEF25A6NGN4 478 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 FGBP02675 491 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 ZNF8P17098 575 aaPredicted RBP24.54■■□□□ 1.52
COL13A1-203ENST00000398969 GABRB1P18505 474 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 TMED10P49755 219 aaKnown RBP24.54■■□□□ 1.52
COL13A1-203ENST00000398969 MICAQ29983 383 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 EXOC3L2Q2M3D2 409 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 TMEM25Q86YD3 366 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 LGI4Q8N135 537 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 RASGEF1AQ8N9B8 481 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 ZNF675Q8TD23 568 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 HPS1Q92902 700 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 NEIL2Q969S2 332 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 TMEM106CQ9BVX2 250 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 WASH3PC4AMC7 463 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 CXCL14O95715 111 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 PTX3P26022 381 aaPredicted RBP24.54■■□□□ 1.52
COL13A1-203ENST00000398969 GRK5P34947 590 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 E2F2Q14209 437 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 COLEC12Q5KU26 742 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 GCNT6Q5T4J0 391 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 LILRA6Q6PI73 481 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 SLCO4C1Q6ZQN7 724 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 SLC35A5Q9BS91 424 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 SLC46A2Q9BY10 475 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 REEP4Q9H6H4 257 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 ABCB10Q9NRK6 738 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 SACM1LQ9NTJ5 587 aa24.54■■□□□ 1.52
COL13A1-203ENST00000398969 SLC5A10A0PJK1 596 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 AGAP5A6NIR3 686 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 QSOX1O00391 747 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 STSP08842 583 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 SCARB2Q14108 478 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 MED27Q6P2C8 311 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 TUBA3EQ6PEY2 450 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 ARMC8Q8IUR7 673 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 LYSMD2Q8IV50 215 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 OR52N2Q8NGI0 321 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 MYLIPQ8WY64 445 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 RAD9AQ99638 391 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 ZSCAN5AQ9BUG6 496 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 THSD1Q9NS62 852 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 CXXC1Q9P0U4 656 aaPredicted RBP24.53■■□□□ 1.52
COL13A1-203ENST00000398969 INSL6Q9Y581 213 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 MYOFQ9NZM1 2061 aa24.53■■□□□ 1.52
COL13A1-203ENST00000398969 TAF4O00268 1085 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 C6orf47O95873 294 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 LRG1P02750 347 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 RPLP0P05388 317 aaKnown RBP24.52■■□□□ 1.52
COL13A1-203ENST00000398969 PABPC1P11940 636 aaKnown RBP24.52■■□□□ 1.52
COL13A1-203ENST00000398969 TEKQ02763 1124 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 ZNF763Q0D2J5 394 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 TMPRSS11BQ86T26 416 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 ZNF605Q86T29 641 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 NFKBIDQ8NI38 313 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.52■■□□□ 1.52
COL13A1-203ENST00000398969 BTN2A2Q8WVV5 523 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 ABHD8Q96I13 439 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 TCF25Q9BQ70 676 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 C6orf62Q9GZU0 229 aaPredicted RBP24.52■■□□□ 1.52
COL13A1-203ENST00000398969 ZNF229Q9UJW7 825 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 CCL26Q9Y258 94 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 KCNE2Q9Y6J6 123 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 A3GALT2U3KPV4 340 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 ISPDA4D126 451 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 NEDD8-MDP1E9PL57 170 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 ATG13O75143 517 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 ADORA3P0DMS8 318 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 DBTP11182 482 aaKnown RBP24.52■■□□□ 1.52
COL13A1-203ENST00000398969 FCHO2Q0JRZ9 810 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 CDC20Q12834 499 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 DEPDC4Q8N2C3 294 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 DENND6BQ8NEG7 585 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 COL21A1Q96P44 957 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 HEPHQ9BQS7 1158 aa24.52■■□□□ 1.52
COL13A1-203ENST00000398969 NXF2Q9GZY0 626 aaKnown RBP24.52■■□□□ 1.52
COL13A1-203ENST00000398969 SP140LQ9H930 580 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms