RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ARMC12Q5T9G4 340 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 PNCKQ6P2M8 343 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CBLL1Q75N03 491 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 PGBD5Q8N414 524 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 GALNT11Q8NCW6 608 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 OR13C4Q8NGS5 318 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CDK15Q96Q40 435 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 SLC12A9Q9BXP2 914 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 FXYD6Q9H0Q3 95 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 SLC32A1Q9H598 525 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 EIF2B4Q9UI10 523 aaKnown RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 INTS6Q9UL03 887 aaKnown RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 RAB23Q9ULC3 237 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 PADI2Q9Y2J8 665 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 MAB21L2Q9Y586 359 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 ANK1P16157 1881 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 NT5C1B-RDH14C9J2C7 533 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 INMT-MINDY4F8WBC2 141 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 NUPL2O15504 423 aaKnown RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 MSI1O43347 362 aaKnown RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 B4GAT1O43505 415 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CLDN9O95484 217 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CD1EP15812 388 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 HLA-FP30511 346 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 EIF2DP41214 584 aaKnown RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 TAF1CQ15572 869 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 C19orf48Q6RUI8 117 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 ITIH5Q86UX2 942 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 C11orf65Q8NCR3 313 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 SMG7Q92540 1137 aaKnown RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 LGALS12Q96DT0 336 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 COL21A1Q96P44 957 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 GABARAPL3Q9BY60 117 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 FAM83DQ9H4H8 585 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 NUFIP1Q9UHK0 495 aaKnown RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 PAPPA2Q9BXP8 1791 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 IQCMA0A1B0GVH7 501 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 MTMR11A4FU01 709 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF879B4DU55 563 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 H7C2Y5 167 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 MANBAO00462 879 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 ITGA3P26006 1051 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 PTPN6P29350 595 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CASP3P42574 277 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 GZMMP51124 257 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 PGGT1BP53609 377 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CLCA4Q14CN2 919 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 FAM174BQ3ZCQ3 159 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 FAM217AQ8IXS0 508 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CPNE9Q8IYJ1 553 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 IGSF8Q969P0 613 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CRELD1Q96HD1 420 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 KCNA7Q96RP8 456 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 FAM83CQ9BQN1 747 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 POLR2J2Q9GZM3 115 aaKnown RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CHMP1AQ9HD42 196 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 TRAPPC4Q9Y296 219 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 TMEM98Q9Y2Y6 226 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 IFT52Q9Y366 437 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 SPO11Q9Y5K1 396 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 MEIS3P2A8K0S8 358 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 JRKO75564 520 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 ECDO95905 644 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 DGKQP52824 942 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CASP9P55211 416 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 FOXA1P55317 472 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 PRKCDQ05655 676 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 TSC22D1Q15714 1073 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 IQCCQ4KMZ1 466 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 RFTN2Q52LD8 501 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF691Q5VV52 312 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CIR1Q86X95 450 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 KRT78Q8N1N4 520 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 OR5H6Q8NGV6 325 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 SNAPC3Q92966 411 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 ARPC5LQ9BPX5 153 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 MAPKAP1Q9BPZ7 522 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 KLHL28Q9NXS3 571 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 TRAV6A0A075B6T7 132 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 PPP6CO00743 305 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 PIPP12273 146 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 HK3P52790 923 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 IRF8Q02556 426 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 HNRNPA0Q13151 305 aaKnown RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CDK5R2Q13319 367 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 GBX1Q14549 363 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 SMCO1Q147U7 214 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 ZNF630Q2M218 657 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 ANXA8L1Q5VT79 327 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 HAGHLQ6PII5 290 aaPredicted RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 ADGRD2Q7Z7M1 963 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 OR4F6Q8NGB9 312 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 SLC22A17Q8WUG5 538 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CD244Q9BZW8 370 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 MKRN2Q9H000 416 aaKnown RBP5.26□□□□□ -1.57
PTPRD-205ENST00000397611 RPS6KB2Q9UBS0 482 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 CPA4Q9UI42 421 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 EVPLQ92817 2033 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 ZSWIM8A7E2V4 1837 aa5.26□□□□□ -1.57
PTPRD-205ENST00000397611 SLC35F4A4IF30 521 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms