RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 NUDT13Q86X67 352 aa26.17■■□□□ 1.78
CPNE1-203ENST00000397442 MCATQ8IVS2 390 aaKnown RBP26.17■■□□□ 1.78
CPNE1-203ENST00000397442 CAMKVQ8NCB2 501 aa26.17■■□□□ 1.78
CPNE1-203ENST00000397442 IFI44Q8TCB0 444 aa26.17■■□□□ 1.78
CPNE1-203ENST00000397442 C16orf78Q8WTQ4 265 aa26.17■■□□□ 1.78
CPNE1-203ENST00000397442 GFM2Q969S9 779 aaKnown RBP26.17■■□□□ 1.78
CPNE1-203ENST00000397442 C1orf21Q9H246 121 aa26.17■■□□□ 1.78
CPNE1-203ENST00000397442 EXO1Q9UQ84 846 aaKnown RBP26.17■■□□□ 1.78
CPNE1-203ENST00000397442 A0A1W2PP18 115 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 AIM2O14862 343 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 PRMT3O60678 531 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 RASSF9O75901 435 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 ZBTB11O95625 1053 aaPredicted RBP26.16■■□□□ 1.78
CPNE1-203ENST00000397442 SMIM10L1P0DMW3 83 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 PRPS1L1P21108 318 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 ASMTP46597 345 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 DGKQP52824 942 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 DAB2P98082 770 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 ZC3H12BQ5HYM0 836 aaKnown RBP26.16■■□□□ 1.78
CPNE1-203ENST00000397442 CCNYL2Q5T2Q4 361 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 REP15Q6BDI9 236 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 PRSS42Q7Z5A4 293 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 KIF2BQ8N4N8 673 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 UTP15Q8TED0 518 aaKnown RBP26.16■■□□□ 1.78
CPNE1-203ENST00000397442 GAL3ST3Q96A11 431 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 TESCQ96BS2 214 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 KLHL29Q96CT2 875 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 SMIM10Q96HG1 83 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 KCNC2Q96PR1 638 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 BTBD10Q9BSF8 475 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 MYNNQ9NPC7 610 aa26.16■■□□□ 1.78
CPNE1-203ENST00000397442 ATXN7L1Q9ULK2 861 aaPredicted RBP26.16■■□□□ 1.78
CPNE1-203ENST00000397442 A0A0A6YYD5 115 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 FLRT2O43155 660 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 TMPRSS11DO60235 418 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 CLNS1AP54105 237 aaKnown RBP26.15■■□□□ 1.78
CPNE1-203ENST00000397442 VSX2P58304 361 aaPredicted RBP26.15■■□□□ 1.78
CPNE1-203ENST00000397442 SPEM2Q0P670 501 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 TLR1Q15399 786 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 FAM174BQ3ZCQ3 159 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 TIGD2Q4W5G0 525 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 SPANXN4Q5MJ08 99 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 TRIM40Q6P9F5 258 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 ZNF574Q6ZN55 896 aaPredicted RBP26.15■■□□□ 1.78
CPNE1-203ENST00000397442 SRFBP1Q8NEF9 429 aaKnown RBP26.15■■□□□ 1.78
CPNE1-203ENST00000397442 QRFPRQ96P65 431 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 ZBTB18Q99592 522 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 EFCAB1Q9HAE3 211 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 COL5A1P20908 1838 aaPredicted RBP26.15■■□□□ 1.78
CPNE1-203ENST00000397442 CCDC154A6NI56 674 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 BBIP1A8MTZ0 92 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 AKAP10O43572 662 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 B3GALT4O96024 378 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 EIF2S1P05198 315 aaKnown RBP26.15■■□□□ 1.78
CPNE1-203ENST00000397442 RPLP0P05388 317 aaKnown RBP26.15■■□□□ 1.78
CPNE1-203ENST00000397442 SSR2P43308 183 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 DUSP3P51452 185 aaPredicted RBP26.15■■□□□ 1.78
CPNE1-203ENST00000397442 RAB8AP61006 207 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 SLC25A3Q00325 362 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 UGT8Q16880 541 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 MANEAQ5SRI9 462 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 TMEM71Q6P5X7 295 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 CSNK1A1LQ8N752 337 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 CDC26Q8NHZ8 85 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 TBCDQ9BTW9 1192 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 ZMYND15Q9H091 742 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 KCNH6Q9H252 994 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 LRRN3Q9H3W5 708 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 PDE7BQ9NP56 450 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 SOHLH2Q9NX45 425 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 MAP10Q9P2G4 905 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 NDUFAF1Q9Y375 327 aa26.15■■□□□ 1.78
CPNE1-203ENST00000397442 CUL9Q8IWT3 2517 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 DYTNA2CJ06 578 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 ZNF888P0CJ79 500 aaPredicted RBP26.14■■□□□ 1.78
CPNE1-203ENST00000397442 CD59P13987 128 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 ITGAXP20702 1163 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 MLLT3P42568 568 aaPredicted RBP26.14■■□□□ 1.78
CPNE1-203ENST00000397442 NUDT2P50583 147 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 TAS2R50P59544 299 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 PHC1P78364 1004 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 INAVAQ3KP66 663 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 OTOGLQ3ZCN5 2332 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 FAM71E1Q6IPT2 247 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 PRR23CQ6ZRP0 262 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 ARHGEF39Q8N4T4 335 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 OR8K5Q8NH50 307 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 ZNF285Q96NJ3 590 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 SEMA4GQ9NTN9 838 aa26.14■■□□□ 1.78
CPNE1-203ENST00000397442 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.14■■□□□ 1.788e-7■□□□□ 11.1
CPNE1-203ENST00000397442 MRPS2Q9Y399 296 aaKnown RBP26.14■■□□□ 1.78
CPNE1-203ENST00000397442 ASCC3Q8N3C0 2202 aaKnown RBP26.14■■□□□ 1.77
CPNE1-203ENST00000397442 GYG2O15488 501 aa26.13■■□□□ 1.77
CPNE1-203ENST00000397442 ZSCAN9O15535 394 aaPredicted RBP26.13■■□□□ 1.77
CPNE1-203ENST00000397442 SRPX2O60687 465 aaPredicted RBP26.13■■□□□ 1.77
CPNE1-203ENST00000397442 SCELO95171 688 aa26.13■■□□□ 1.77
CPNE1-203ENST00000397442 CPNE6O95741 557 aa26.13■■□□□ 1.77
CPNE1-203ENST00000397442 HIST1H1TP22492 207 aaPredicted RBP26.13■■□□□ 1.77
CPNE1-203ENST00000397442 ATP5A1P25705 553 aaKnown RBP26.13■■□□□ 1.77
CPNE1-203ENST00000397442 TSFMP43897 325 aaKnown RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms