RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 C7orf57Q8NEG2 295 aa15.37■□□□□ 0.05
DDR1-229ENST00000396342 OR5T3Q8NGG3 340 aa15.37■□□□□ 0.05
DDR1-229ENST00000396342 ITLN2Q8WWU7 325 aaPredicted RBP15.37■□□□□ 0.05
DDR1-229ENST00000396342 TSLPQ969D9 159 aa15.37■□□□□ 0.05
DDR1-229ENST00000396342 UNKQ9C0B0 810 aaKnown RBP15.37■□□□□ 0.05
DDR1-229ENST00000396342 COPS7BQ9H9Q2 264 aaPredicted RBP15.37■□□□□ 0.05
DDR1-229ENST00000396342 LANCL2Q9NS86 450 aa15.37■□□□□ 0.05
DDR1-229ENST00000396342 SH2B3Q9UQQ2 575 aa15.37■□□□□ 0.05
DDR1-229ENST00000396342 MMACHCQ9Y4U1 282 aa15.37■□□□□ 0.05
DDR1-229ENST00000396342 SAGE2PA6NJ88 616 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 CLGNO14967 610 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 ASNA1O43681 348 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 B3GALT2O43825 422 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 BANF1O75531 89 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 SNRNP200O75643 2136 aaKnown RBP15.36■□□□□ 0.05
DDR1-229ENST00000396342 GABRB3P28472 473 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 BTN3A2P78410 334 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 CDKL1Q00532 357 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 REEP5Q00765 189 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 SLC13A2Q13183 592 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 HIST2H2ACQ16777 129 aaPredicted RBP15.36■□□□□ 0.05
DDR1-229ENST00000396342 ZNF630Q2M218 657 aaPredicted RBP15.36■□□□□ 0.05
DDR1-229ENST00000396342 TOR1AIP1Q5JTV8 583 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 HIST2H2AA3Q6FI13 130 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 PAOXQ6QHF9 649 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 AGGF1Q8N302 714 aaeCLIP15.36■□□□□ 0.05
DDR1-229ENST00000396342 TCAIMQ8N3R3 496 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 UTP15Q8TED0 518 aaKnown RBP15.36■□□□□ 0.05
DDR1-229ENST00000396342 SCMH1Q96GD3 660 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 SEC16BQ96JE7 1060 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 CAPZA3Q96KX2 299 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 SIGLEC12Q96PQ1 595 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 OLFM1Q99784 485 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 PITHD1Q9GZP4 211 aaPredicted RBP15.36■□□□□ 0.05
DDR1-229ENST00000396342 TSPAN10Q9H1Z9 355 aaPredicted RBP15.36■□□□□ 0.05
DDR1-229ENST00000396342 TRMT1Q9NXH9 659 aaKnown RBP15.36■□□□□ 0.05
DDR1-229ENST00000396342 FBXW2Q9UKT8 454 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 ERVK-11Q9UQG0 969 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 SLC22A14Q9Y267 594 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 SPACA6W5XKT8 324 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 CCDC88CQ9P219 2028 aa15.36■□□□□ 0.05
DDR1-229ENST00000396342 UTP20O75691 2785 aaKnown RBP15.35■□□□□ 0.05
DDR1-229ENST00000396342 FAM95CA0A1B0GW59 222 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 ASPDHA6ND91 283 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 WDR47O94967 919 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 ZNF37AP17032 561 aaPredicted RBP15.35■□□□□ 0.05
DDR1-229ENST00000396342 HLCSP50747 726 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 PDIA2Q13087 525 aaKnown RBP15.35■□□□□ 0.05
DDR1-229ENST00000396342 CALCOCO2Q13137 446 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 FRG1Q14331 258 aaKnown RBP15.35■□□□□ 0.05
DDR1-229ENST00000396342 C3AR1Q16581 482 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 TRIM40Q6P9F5 258 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 ELP5Q8TE02 316 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 CHTF18Q8WVB6 975 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 GAL3ST3Q96A11 431 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 NPLQ9BXD5 320 aaPredicted RBP15.35■□□□□ 0.05
DDR1-229ENST00000396342 ROGDIQ9GZN7 287 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 TIMMDC1Q9NPL8 285 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 PNO1Q9NRX1 252 aaKnown RBP15.35■□□□□ 0.05
DDR1-229ENST00000396342 WWOXQ9NZC7 414 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 TINAGQ9UJW2 476 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 OARD1Q9Y530 152 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 NUP210LQ5VU65 1888 aa15.35■□□□□ 0.05
DDR1-229ENST00000396342 NPEPPSL1A6NEC2 478 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 A8MUA0 341 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 CCDC188H7C350 402 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 NME2P1O60361 137 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 CLDN14O95500 239 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 IFNA16P05015 189 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 SNRPB2P08579 225 aaKnown RBP15.34■□□□□ 0.05
DDR1-229ENST00000396342 C1GALT1C1LP0DN25 315 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 MAOAP21397 527 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 NME2P22392 152 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 TPP2P29144 1249 aaPredicted RBP15.34■□□□□ 0.05
DDR1-229ENST00000396342 ITGA8P53708 1063 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 MLF1P58340 268 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 TIAL1Q01085 375 aaKnown RBP eCLIP15.34■□□□□ 0.05
DDR1-229ENST00000396342 TERF2Q15554 542 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 MSS51Q4VC12 460 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 PAGE2BQ5JRK9 111 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 TMEM211Q6ICI0 200 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 TMIGD1Q6UXZ0 262 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 ANKMY2Q8IV38 441 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 CA5BP1Q8WTZ4 195 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 FRMD6Q96NE9 622 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 OR4K3Q96R72 315 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 TRIM31Q9BZY9 425 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 SLC6A16Q9GZN6 736 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 POPDC3Q9HBV1 291 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 PRTFDC1Q9NRG1 225 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 CLCA3PQ9Y6N3 262 aa15.34■□□□□ 0.05
DDR1-229ENST00000396342 TRBV11-1A0A0K0K1C0 115 aa15.33■□□□□ 0.04
DDR1-229ENST00000396342 TCRBV16S1A1N1A0A5B0 115 aa15.33■□□□□ 0.04
DDR1-229ENST00000396342 EFCAB8A8MWE9 144 aa15.33■□□□□ 0.04
DDR1-229ENST00000396342 ACOT7O00154 380 aa15.33■□□□□ 0.04
DDR1-229ENST00000396342 ERI3O43414 337 aaKnown RBP15.33■□□□□ 0.04
DDR1-229ENST00000396342 DYRK3O43781 588 aa15.33■□□□□ 0.04
DDR1-229ENST00000396342 MYO1DO94832 1006 aa15.33■□□□□ 0.04
DDR1-229ENST00000396342 SSTR2P30874 369 aa15.33■□□□□ 0.04
DDR1-229ENST00000396342 SSR4P51571 173 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms