RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ATE1O95260 518 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 C9P02748 559 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 GBAP04062 536 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 NTRK1P04629 796 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 AGXTP21549 392 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 SERPINB1P30740 379 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 CLK3P49761 638 aaKnown RBP16.08■□□□□ 0.16
NUP50-202ENST00000396096 SELENOWP63302 87 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 RAPSNQ13702 412 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 COX20Q5RI15 118 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 FAM109BQ6ICB4 259 aaPredicted RBP16.08■□□□□ 0.16
NUP50-202ENST00000396096 ZNF852Q6ZMS4 543 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 C17orf64Q86WR6 236 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 GAB3Q8WWW8 586 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 MAL2Q969L2 176 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 CIDECQ96AQ7 238 aaPredicted RBP16.08■□□□□ 0.16
NUP50-202ENST00000396096 LGR4Q9BXB1 951 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 PITHD1Q9GZP4 211 aaPredicted RBP16.08■□□□□ 0.16
NUP50-202ENST00000396096 C1GALT1Q9NS00 363 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 TAS2R9Q9NYW1 312 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 PLAGL1Q9UM63 463 aa16.08■□□□□ 0.16
NUP50-202ENST00000396096 CHD7Q9P2D1 2997 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 ANTXRLA6NF34 631 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 KMOO15229 486 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 DIRAS1O95057 198 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 CXCR2P25025 360 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 TPP2P29144 1249 aaPredicted RBP16.07■□□□□ 0.16
NUP50-202ENST00000396096 CRATP43155 626 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 CXCR4P61073 352 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 EEF1A2Q05639 463 aaKnown RBP16.07■□□□□ 0.16
NUP50-202ENST00000396096 CST6Q15828 149 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 PRSS53Q2L4Q9 553 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 IER5LQ5T953 404 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 GALNT5Q7Z7M9 940 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 ST13P5Q8NFI4 369 aaPredicted RBP16.07■□□□□ 0.16
NUP50-202ENST00000396096 ABHD11Q8NFV4 315 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 TPD52L3Q96J77 140 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 TRPM6Q9BX84 2022 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 LMAN2LQ9H0V9 348 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 THUMPD1Q9NXG2 353 aaKnown RBP16.07■□□□□ 0.16
NUP50-202ENST00000396096 NDRG4Q9ULP0 352 aaKnown RBP16.07■□□□□ 0.16
NUP50-202ENST00000396096 PCDHGB3Q9Y5G1 929 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 PCDHGB1Q9Y5G3 927 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 STON1Q9Y6Q2 735 aa16.07■□□□□ 0.16
NUP50-202ENST00000396096 LAMA2P24043 3122 aaKnown RBP16.06■□□□□ 0.16
NUP50-202ENST00000396096 MID1O15344 667 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 TBX6O95947 436 aaPredicted RBP16.06■□□□□ 0.16
NUP50-202ENST00000396096 IL3P08700 152 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 ETFAP13804 333 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 JUNDP17535 347 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 ITIH1P19827 911 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 MATN1P21941 496 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 REEP5Q00765 189 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 DMPKQ09013 629 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 LAPTM4AQ15012 233 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 DEPDC1Q5TB30 811 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 AP1ARQ63HQ0 302 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 TRIM40Q6P9F5 258 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 TSEN54Q7Z6J9 526 aaKnown RBP16.06■□□□□ 0.16
NUP50-202ENST00000396096 NATD1Q8N6N6 113 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 SMPDL3AQ92484 453 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 SGCDQ92629 289 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 MUL1Q969V5 352 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 PITX2Q99697 317 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 AIF1LQ9BQI0 150 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 MS4A8Q9BY19 250 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 ZNF717Q9BY31 904 aaPredicted RBP16.06■□□□□ 0.16
NUP50-202ENST00000396096 LHPPQ9H008 270 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 RIBC2Q9H4K1 309 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 ZDHHC4Q9NPG8 344 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 SPASTQ9UBP0 616 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 RAPGEFL1Q9UHV5 662 aa16.06■□□□□ 0.16
NUP50-202ENST00000396096 TDRKHQ9Y2W6 561 aaKnown RBP16.06■□□□□ 0.16
NUP50-202ENST00000396096 A0A1B0GVG6 124 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 A0A1W2PRB8 838 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 NOL3O60936 208 aaKnown RBP16.05■□□□□ 0.16
NUP50-202ENST00000396096 KRT75O95678 551 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 ADH1BP00325 375 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 TRIM23P36406 574 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 HPCAP84074 193 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 IL5RAQ01344 420 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 DCTN2Q13561 401 aaKnown RBP16.05■□□□□ 0.16
NUP50-202ENST00000396096 SCARB2Q14108 478 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 ZNF630Q2M218 657 aaPredicted RBP16.05■□□□□ 0.16
NUP50-202ENST00000396096 KHDRBS2Q5VWX1 349 aaKnown RBP16.05■□□□□ 0.16
NUP50-202ENST00000396096 ZC3H7AQ8IWR0 971 aaKnown RBP16.05■□□□□ 0.16
NUP50-202ENST00000396096 TTC29Q8NA56 475 aaPredicted RBP16.05■□□□□ 0.16
NUP50-202ENST00000396096 NODALQ96S42 347 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 CDCA3Q99618 268 aaPredicted RBP16.05■□□□□ 0.16
NUP50-202ENST00000396096 APOL4Q9BPW4 351 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 NAA50Q9GZZ1 169 aaKnown RBP16.05■□□□□ 0.16
NUP50-202ENST00000396096 EPS8L2Q9H6S3 715 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 KRT84Q9NSB2 600 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 TAAR2Q9P1P5 351 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 TAC3Q9UHF0 121 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 ACSL5Q9ULC5 683 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 DOCK8Q8NF50 2099 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 A0A1W2PPV9 198 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 PLPP1O14494 284 aa16.05■□□□□ 0.16
NUP50-202ENST00000396096 ANGPTL1O95841 491 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms