RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 MPIP34949 423 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 NRIP1P48552 1158 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 NCBP2P52298 156 aaKnown RBP eCLIP6.31□□□□□ -1.4
BDNF-203ENST00000395978 NUDT6P53370 316 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 SEC13P55735 322 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 ITGA1P56199 1179 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 RGS8P57771 180 aaPredicted RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 NPRL3Q12980 569 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 TARDBPQ13148 414 aaKnown RBP eCLIP6.31□□□□□ -1.4
BDNF-203ENST00000395978 NFE2L1Q14494 772 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 ZNF730Q6ZMV8 503 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 EPHX4Q8IUS5 362 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 C10orf53Q8N6V4 93 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 RASGEF1AQ8N9B8 481 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 C9orf43Q8TAL5 461 aaPredicted RBP6.31□□□□□ -1.4
BDNF-203ENST00000395978 OR5P2Q8WZ92 322 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 C19orf43Q9BQ61 176 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 IL1RAPQ9NPH3 570 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 C11orf16Q9NQ32 467 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 FBXL12Q9NXK8 326 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 P2RX2Q9UBL9 471 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 BTNL2Q9UIR0 455 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 KCNK6Q9Y257 313 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 LYVE1Q9Y5Y7 322 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 HSPE1-MOB4S4R3N1 261 aa6.31□□□□□ -1.4
BDNF-203ENST00000395978 RLFQ13129 1914 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 HEPACAM2A8MVW5 462 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 J3QRK9 145 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 ALPLP05186 524 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 RPLP0P05388 317 aaKnown RBP6.3□□□□□ -1.4
BDNF-203ENST00000395978 ALOX5P09917 674 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 SMIM18P0DKX4 95 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 ETFAP13804 333 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 UQCRC2P22695 453 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 HRH2P25021 359 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 SLC5A2P31639 672 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 KHKP50053 298 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 GABARAPL2P60520 117 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 HTRA3P83110 453 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 UBE3AQ05086 875 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 IHHQ14623 411 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 RGNQ15493 299 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 HNRNPA1L2Q32P51 320 aaKnown RBP6.3□□□□□ -1.4
BDNF-203ENST00000395978 CATSPEREQ5SY80 951 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 CDC73Q6P1J9 531 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 UNC5DQ6UXZ4 953 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 PLEKHM3Q6ZWE6 761 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 PARS2Q7L3T8 475 aaKnown RBP6.3□□□□□ -1.4
BDNF-203ENST00000395978 TSPYL5Q86VY4 417 aaPredicted RBP6.3□□□□□ -1.4
BDNF-203ENST00000395978 SAMD14Q8IZD0 417 aaPredicted RBP6.3□□□□□ -1.4
BDNF-203ENST00000395978 GJD3Q8N144 294 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 NAGSQ8N159 534 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 TMEM145Q8NBT3 493 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 OR52L1Q8NGH7 329 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 OR52N2Q8NGI0 321 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 SLC9A6Q92581 669 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 RAB8BQ92930 207 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 BADQ92934 168 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 HSPBAP1Q96EW2 488 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 DTD2Q96FN9 168 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 ALPK1Q96QP1 1244 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 IL4I1Q96RQ9 567 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 CPPED1Q9BRF8 314 aaPredicted RBP6.3□□□□□ -1.4
BDNF-203ENST00000395978 CARS2Q9HA77 564 aaKnown RBP6.3□□□□□ -1.4
BDNF-203ENST00000395978 PREBQ9HCU5 417 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 ERVK-18Q9QC07 812 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 DNMT3BQ9UBC3 853 aaKnown RBP6.3□□□□□ -1.4
BDNF-203ENST00000395978 DKK3Q9UBP4 350 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 BTBD3Q9Y2F9 522 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 PCDHGA8Q9Y5G5 932 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 HEBP2Q9Y5Z4 205 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 TRBV5-4A0A0C4DH59 114 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 IRGMA1A4Y4 181 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 GABRR3A8MPY1 467 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 HIDE1A8MVS5 230 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 ARHGEF9O43307 516 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 B4GAT1O43505 415 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 DYRK3O43781 588 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 OR10H2O60403 315 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 TPST2O60704 377 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 INMTO95050 263 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 VIPP01282 170 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 CD247P20963 164 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 PDHA2P29803 388 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 TIE1P35590 1138 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 PRLHRP49683 370 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 ERVFC1P60507 584 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 TAGLNQ01995 201 aaKnown RBP6.3□□□□□ -1.4
BDNF-203ENST00000395978 ILF3Q12906 894 aaKnown RBP eCLIP6.3□□□□□ -1.4
BDNF-203ENST00000395978 LARS2Q15031 903 aaKnown RBP6.3□□□□□ -1.4
BDNF-203ENST00000395978 IER5LQ5T953 404 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 ZNF776Q68DI1 518 aaPredicted RBP6.3□□□□□ -1.4
BDNF-203ENST00000395978 Q6ZNB5 142 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 GATAD2AQ86YP4 633 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 VRK3Q8IV63 474 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 AQP11Q8NBQ7 271 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 ZNF480Q8WV37 535 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 MAL2Q969L2 176 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 F2RL3Q96RI0 385 aa6.3□□□□□ -1.4
BDNF-203ENST00000395978 MCCC1Q96RQ3 725 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms