RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ITPKAP23677 461 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 GMPRP36959 345 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 DCDC1P59894 354 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 DNAJB13P59910 316 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 RPS7P62081 194 aaKnown RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 ERVK-8P63133 956 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 NAE1Q13564 534 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ATP6AP1Q15904 470 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 GPAT3Q53EU6 434 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 RABL3Q5HYI8 236 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ZNF776Q68DI1 518 aaPredicted RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 CFAP77Q6ZQR2 320 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 SYT12Q8IV01 421 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 DNAJA4Q8WW22 397 aaPredicted RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 SLC38A4Q969I6 547 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 ERMAPQ96PL5 475 aaPredicted RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 SLX1AQ9BQ83 275 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 OR2AG1Q9H205 316 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 MMP28Q9H239 520 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 NKIRAS2Q9NYR9 191 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 PDP1Q9P0J1 537 aaPredicted RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 SH3BP4Q9P0V3 963 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 EIF2B4Q9UI10 523 aaKnown RBP5.5□□□□□ -1.53
RFFL-202ENST00000394597 DHRS7Q9Y394 339 aa5.5□□□□□ -1.53
RFFL-202ENST00000394597 A0A0G2JMZ2 1700 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 IQCF5A8MTL0 148 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 CHURC1-FNTBB4DL54 471 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 CDC7O00311 574 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 LDB2O43679 373 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 OR1I1O60431 355 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 KAT7O95251 611 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SLC35E2BP0CK96 405 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 IDSP22304 550 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 IRS1P35568 1242 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 CD47Q08722 323 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 MAPKAPK3Q16644 382 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 GPRC6AQ5T6X5 926 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 DDI2Q5TDH0 399 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 BHLHA9Q7RTU4 235 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 NRARPQ7Z6K4 114 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 CEP97Q8IW35 865 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 GPR150Q8NGU9 434 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 IPCEF1Q8WWN9 437 aaPredicted RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 FGF13Q92913 245 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 ESAMQ96AP7 390 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 TESCQ96BS2 214 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 PTERQ96BW5 349 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 CXorf40BQ96DE9 158 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 CNDP2Q96KP4 475 aaKnown RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 HYLS1Q96M11 299 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 NECTIN4Q96NY8 510 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 QRFPRQ96P65 431 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 P2RY13Q9BPV8 354 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 BCL7BQ9BQE9 202 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 NUSAP1Q9BXS6 441 aaKnown RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 ATG10Q9H0Y0 220 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 CHMP1AQ9HD42 196 aaPredicted RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 POLMQ9NP87 494 aaPredicted RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 TREX1Q9NSU2 369 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 NFKBIL1Q9UBC1 381 aaPredicted RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 ZNF490Q9ULM2 529 aaPredicted RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 NDRG2Q9UN36 371 aaKnown RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 PRKAB1Q9Y478 270 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 H3BNC9 293 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SLC31A1O15431 190 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SSX5O60225 188 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SH3BGRLO75368 114 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 MTX2O75431 263 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SEC14L2O76054 403 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 KLHL18O94889 574 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 OR4F21O95013 312 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 C9P02748 559 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SLC2A2P11168 524 aaPredicted RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 PTPRZ1P23471 2315 aaPredicted RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 SOAT1P35610 550 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 CTSOP43234 321 aaPredicted RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 GNPDA1P46926 289 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 CAPZA2P47755 286 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 RGRP47804 291 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 STARP49675 285 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 RORCP51449 518 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SGSHP51688 502 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 GABARAPL2P60520 117 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 RPL38P63173 70 aaKnown RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 LAPTM5Q13571 262 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 ELAVL3Q14576 367 aaKnown RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 POU4F3Q15319 338 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 ZMYND11Q15326 602 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SHHQ15465 462 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 PSAPL1Q6NUJ1 521 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 NAPRTQ6XQN6 538 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 ERN2Q76MJ5 926 aaKnown RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 PGBD5Q8N414 524 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 CHST14Q8NCH0 376 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SRFBP1Q8NEF9 429 aaKnown RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 FAM83FQ8NEG4 500 aaPredicted RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 PHF10Q8WUB8 498 aaKnown RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 CIDECQ96AQ7 238 aaPredicted RBP5.49□□□□□ -1.53
RFFL-202ENST00000394597 SGTBQ96EQ0 304 aa5.49□□□□□ -1.53
RFFL-202ENST00000394597 SORT1Q99523 831 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms