RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 C8GP07360 202 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 NPPBP16860 134 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 VPS41P49754 854 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 SKP1P63208 163 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 TRIP13Q15645 432 aaPredicted RBP14.35□□□□□ -0.11
CHMP3-202ENST00000393773 LMNTD2Q8IXW0 634 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 CYP4X1Q8N118 509 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 CYP4Z2PQ8N1L4 340 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 EEF1AKMT1Q8WVE0 214 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 NRGNQ92686 78 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 SEC16BQ96JE7 1060 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 PTCHD1Q96NR3 888 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 SERPINB12Q96P63 405 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 OR4K3Q96R72 315 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 TMUB1Q9BVT8 246 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 UCK2Q9BZX2 261 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 PARVBQ9HBI1 364 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 NECTIN3Q9NQS3 549 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 ZNF223Q9UK11 482 aaPredicted RBP14.35□□□□□ -0.11
CHMP3-202ENST00000393773 GUCA1BQ9UMX6 200 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 CTAGE15A4D2H0 777 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 KLRC4-KLRK1H3BQV0 150 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 OR1F1O43749 312 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 PEX1O43933 1283 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 PRMT3O60678 531 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 HAUS5O94927 633 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 MLNP12872 115 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 DNAJA1P31689 397 aaKnown RBP14.34□□□□□ -0.11
CHMP3-202ENST00000393773 MAGEA3P43357 314 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 CCR8P51685 355 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 GPR85P60893 370 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 TMEM211Q6ICI0 200 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 NIPAL1Q6NVV3 410 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 ARHGAP11AQ6P4F7 1023 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 MDGA2Q7Z553 956 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 STRA8Q7Z7C7 330 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 CTAGE6Q86UF2 777 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 TMEM200AQ86VY9 491 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 CCDC71Q8IV32 467 aaPredicted RBP14.34□□□□□ -0.11
CHMP3-202ENST00000393773 OR52N2Q8NGI0 321 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 OR56A3Q8NH54 315 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 UTP15Q8TED0 518 aaKnown RBP14.34□□□□□ -0.11
CHMP3-202ENST00000393773 ALKBH8Q96BT7 664 aaKnown RBP14.34□□□□□ -0.11
CHMP3-202ENST00000393773 NDNQ99608 321 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 HAUS8Q9BT25 410 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 DEFB126Q9BYW3 111 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 PRDM9Q9NQV7 894 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 DEPPQ9NTK1 212 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 KCNN3Q9UGI6 736 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 TRMT6Q9UJA5 497 aaKnown RBP14.34□□□□□ -0.11
CHMP3-202ENST00000393773 FBXO5Q9UKT4 447 aa14.34□□□□□ -0.11
CHMP3-202ENST00000393773 NSD1Q96L73 2696 aaPredicted RBP14.34□□□□□ -0.11
CHMP3-202ENST00000393773 TRBV11-1A0A0K0K1C0 115 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 SLC16A5O15375 505 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 ITGA10O75578 1167 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 HOXD4P09016 255 aaPredicted RBP14.33□□□□□ -0.12
CHMP3-202ENST00000393773 HOXB4P17483 251 aaPredicted RBP14.33□□□□□ -0.12
CHMP3-202ENST00000393773 SCTRP47872 440 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 NUP107P57740 925 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 SARNPP82979 210 aaKnown RBP14.33□□□□□ -0.12
CHMP3-202ENST00000393773 HYAL2Q12891 473 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 GPS1Q13098 491 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 TERF2Q15554 542 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 CATSPEREQ5SY80 951 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 ABHD13Q7L211 337 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 RND1Q92730 232 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 PYCR2Q96C36 320 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 SNF8Q96H20 258 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 ZNF559Q9BR84 538 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 SLC6A16Q9GZN6 736 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 AICDAQ9GZX7 198 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 CXXC4Q9H2H0 198 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 XAB2Q9HCS7 855 aaKnown RBP14.33□□□□□ -0.12
CHMP3-202ENST00000393773 C20orf96Q9NUD7 363 aaPredicted RBP14.33□□□□□ -0.12
CHMP3-202ENST00000393773 ZFP69BQ9UJL9 534 aa14.33□□□□□ -0.12
CHMP3-202ENST00000393773 PPIEQ9UNP9 301 aaKnown RBP14.33□□□□□ -0.12
CHMP3-202ENST00000393773 ABCA4P78363 2273 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 ABCA2Q9BZC7 2435 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 PINLYPA6NC86 204 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 SDR42E2A6NKP2 422 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 A8MUA0 341 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 RNH1P13489 461 aaKnown RBP14.32□□□□□ -0.12
CHMP3-202ENST00000393773 AHRP35869 848 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 RGS4P49798 205 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 CLCN2P51788 898 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 CDKN2DP55273 166 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 REEP5Q00765 189 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 RGS1Q08116 209 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 RBM20Q5T481 1227 aaKnown RBP14.32□□□□□ -0.12
CHMP3-202ENST00000393773 DUPD1Q68J44 220 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 TTC27Q6P3X3 843 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 KIAA0408Q6ZU52 694 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 SCUBE1Q8IWY4 988 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 CA13Q8N1Q1 262 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 MYO1HQ8N1T3 1032 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 ANKRD53Q8N9V6 530 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 MCUQ8NE86 351 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 B3GNT7Q8NFL0 401 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 CALML6Q8TD86 181 aa14.32□□□□□ -0.12
CHMP3-202ENST00000393773 MAIP1Q8WWC4 291 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms