RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 HNRNPH1P31943 449 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 PIK3CBP42338 1070 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 XCR1P46094 333 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 RRADP55042 308 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 CDH13P55290 713 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 BTN3A2P78410 334 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 PHEXP78562 749 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 CLCQ05315 142 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 ZNF844Q08AG5 666 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 ATP1A4Q13733 1029 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 ADPRMQ3LIE5 342 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 UNC50Q53HI1 259 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 TRIM40Q6P9F5 258 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 ZYG11AQ6WRX3 759 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 CHSY3Q70JA7 882 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 MED25Q71SY5 747 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 PPP1R32Q7Z5V6 425 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 MRGPREQ86SM8 312 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 CROCCP2Q86T23 111 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 LAPTM4BQ86VI4 370 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 APLFQ8IW19 511 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 ZC3H7AQ8IWR0 971 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 TMEM102Q8N9M5 508 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 BANPQ8N9N5 519 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 SRFBP1Q8NEF9 429 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 OR2L5Q8NG80 312 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 OR52B6Q8NGF0 335 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 RDH11Q8TC12 318 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 CMTM7Q96FZ5 175 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 MAGEB10Q96LZ2 347 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 FER1L6-AS2Q96M78 137 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 CDK15Q96Q40 435 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 F2RL3Q96RI0 385 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 SMC6Q96SB8 1091 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 AICDAQ9GZX7 198 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 MKS1Q9NXB0 559 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 MID2Q9UJV3 735 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 TSC22D4Q9Y3Q8 395 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 CHD6Q8TD26 2715 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 LOC400499M0QZD8 3231 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 IDSB3KWA1 339 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 G3V2L1 256 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 RGS16O15492 202 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 CHST10O43529 356 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 TBX6O95947 436 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 OTCP00480 354 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 TGFB1P01137 390 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 CPA3P15088 417 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 PLA2G16P53816 162 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 POLE2P56282 527 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 DDX39BQ13838 428 aaKnown RBP17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 ZRSR2Q15696 482 aaKnown RBP17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 TMEM35AQ53FP2 167 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 MFSD4BQ5TF39 518 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 RPS27LQ71UM5 84 aaKnown RBP17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 OR5T3Q8NGG3 340 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 HUS1BQ8NHY5 278 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 TRPC4APQ8TEL6 797 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 L3HYPDHQ96EM0 354 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 PEX11GQ96HA9 241 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 APOPT1Q96IL0 206 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 ZIM3Q96PE6 472 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 TMEM237Q96Q45 408 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 MS4A8Q9BY19 250 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 ING2Q9H160 280 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 RRAGDQ9NQL2 400 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 P4HTMQ9NXG6 502 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 SENP1Q9P0U3 644 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 MKL2Q9ULH7 1088 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 PLLPQ9Y342 182 aa17.96■□□□□ 0.47
PDLIM7-204ENST00000393546 CACNA1GO43497 2377 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 C4orf51C9J302 202 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 AGPSO00116 658 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 PCDH17O14917 1159 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 FAM87AP0C7U9 286 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 SFTPCP11686 197 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 TSPAN8P19075 237 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 PTX3P26022 381 aaPredicted RBP17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 NAA20P61599 178 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 OLR1P78380 273 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 TRAF3Q13114 568 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 CEP85LQ5SZL2 805 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 DEPDC1Q5TB30 811 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 TTC19Q6DKK2 380 aaPredicted RBP17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 ABHD17CQ6PCB6 329 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 PCSK4Q6UW60 755 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 LRIG3Q6UXM1 1119 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 EXD3Q8N9H8 876 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 OR4F6Q8NGB9 312 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 KCNC2Q96PR1 638 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 OR1F2PQ96R84 312 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 MTERF1Q99551 399 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 CENPKQ9BS16 269 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 NPLQ9BXD5 320 aaPredicted RBP17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 ROGDIQ9GZN7 287 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 ADNPQ9H2P0 1102 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 C12orf65Q9H3J6 166 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 COPS7BQ9H9Q2 264 aaPredicted RBP17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 ACSS2Q9NR19 701 aa17.95■□□□□ 0.46
PDLIM7-204ENST00000393546 PSD3Q9NYI0 1048 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms